/PDB-Protein-Structure-Prediction

A complicated method to download all PDB sequences for free has been explained here. Also, a youtube video has been made for easier understanding. Check out the link in ReadME. The downloaded sequences are further cleaned for modeling purposes.

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PDB-Protein-Structure-Prediction

From Data Mining to Predicting Secondary Structure of a Protein Sequence.

https://youtu.be/rdG-V3_eewE This video explains how to download PDB database.

PDB ipop - This code is to do parsing/ extract CA coordinates, extract sequence,
one-hot encode the sequence, and to manually calculate the distance matrix for one particular file. - change the file name as your need.