Pinned Repositories
Babel
Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
Benchmarks
BLComplianceService
Validates a ReasonerAPI message for BioLink compliance
EdgeNormalization
A service for producing relationships compliant with the biolink model
NameResolution
A service for finding CURIEs from lexical strings.
NodeNormalization
Service that produces Translator compliant nodes given a curie
ontology-kp
Translator Knowledge Provider for ontology triples
Plater
Plater automatically creates a TRAPI interface for a biolink-compliant neo4j graph.
reasoner-pydantic
Pydantic models for the Reasoner API data formats
trapi-openapi-aggregator
Open api proxy server to aggregate specs of similar infores and trapi versions into single openapi spec for smartapi registration.
TranslatorSRI's Repositories
TranslatorSRI/NodeNormalization
Service that produces Translator compliant nodes given a curie
TranslatorSRI/Babel
Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
TranslatorSRI/reasoner-pydantic
Pydantic models for the Reasoner API data formats
TranslatorSRI/NameResolution
A service for finding CURIEs from lexical strings.
TranslatorSRI/Benchmarks
TranslatorSRI/IssueRouter
Route issues from Translator UI to Translator Services
TranslatorSRI/ontology-kp
Translator Knowledge Provider for ontology triples
TranslatorSRI/Plater
Plater automatically creates a TRAPI interface for a biolink-compliant neo4j graph.
TranslatorSRI/SRI_testing
TranslatorSRI/trapi-openapi-aggregator
Open api proxy server to aggregate specs of similar infores and trapi versions into single openapi spec for smartapi registration.
TranslatorSRI/EdgeNormalization
A service for producing relationships compliant with the biolink model
TranslatorSRI/IssueScreenshots
Screenshot images for created GitHub issues
TranslatorSRI/TranslatorTestingModel
TranslatorSRI/answer-appraiser
TranslatorSRI/babel-validation
Programs for validating compendia generated by Babel
TranslatorSRI/binder
TranslatorSRI/bl_lookup
Biolink Model Lookup Service
TranslatorSRI/bmt-lite
TranslatorSRI/callback-test-app
TranslatorSRI/CQS
TranslatorSRI/graph-validation-test-runners
This repository provides the implementation of some Translator knowledge graph validation Test Runners within the new 2023 Testing Infrastructure.
TranslatorSRI/Jaeger-demo
This repo is some examples on instrumenting python code to perform distributed tracing.
TranslatorSRI/NoveltyScore
Initial novelty score implementation
TranslatorSRI/PerformanceTestRunner
Run performance tests against the Translator system
TranslatorSRI/QueryLogger
TranslatorSRI/RedisTPF
Experimental Implementation of Redis based TRAPI Pattern Fragments
TranslatorSRI/RENCI-Python-image
This specifies a base docker image for RENCI/Python deployments.
TranslatorSRI/StressTester
Stress Test Harness of Translator Services
TranslatorSRI/TestHarness
TranslatorSRI/UI_Test_Runner