UPHL-BioNGS/Cecret

Issues

• Add Ebola Test

  #348 opened 6 months ago by erinyoung
  0

• Version check

  #361 opened 4 months ago by github-actions
  0

• Version check

  #360 opened 5 months ago by github-actions
  0

• Version check

  #357 opened 5 months ago by github-actions
  0

• Version check

  #355 opened 5 months ago by github-actions
  0

• Extra lines in summary file with large number of samples

  #344 opened 6 months ago by garfinjm
  5

• Version check

  #353 opened 5 months ago by github-actions
  0

• Version check

  #350 opened 6 months ago by github-actions
  1

• Adding MT903345 as mpx reference genome

  #342 opened 6 months ago by jl32587
  6

• Add Vivaldi Option

  #349 opened 6 months ago by erinyoung
  1

• Version check

  #345 opened 6 months ago by github-actions
  0

• Version check

  #341 opened 6 months ago by github-actions
  0

• Version check

  #339 opened 7 months ago by github-actions
  0

• Version check

  #336 opened 7 months ago by github-actions
  0

• Version check

  #335 opened 7 months ago by github-actions
  0

• Version check

  #333 opened 7 months ago by github-actions
  0

• Issue with nanopore workflow generating consensus genomes

  #331 opened 7 months ago by garfinjm
  4

• Version check

  #330 opened 7 months ago by github-actions
  1

• Uncommitted changes prevent updating Cecret

  #328 opened 8 months ago by DrB-S
  2

• Version check

  #327 opened 8 months ago by github-actions
  0

• Version check

  #325 opened 8 months ago by github-actions
  1

• Add viridian as an option

  #324 opened 8 months ago by erinyoung
  0

• Version check

  #322 opened 8 months ago by github-actions
  0

• Version check

  #319 opened 8 months ago by github-actions
  0

• Version check

  #317 opened 9 months ago by github-actions
  0

• Producing snps and trees from Covid reads input

  #286 opened 9 months ago by DrB-S
  20

• Version check

  #314 opened 9 months ago by github-actions
  0

• Version check

  #312 opened 9 months ago by github-actions
  0

• Setting a minimum variant cutoff for Freyja

  #311 opened 9 months ago by DrB-S
  2

• Version check

  #309 opened 9 months ago by github-actions
  0

• Version check

  #307 opened 9 months ago by github-actions
  0

• Version check

  #305 opened 10 months ago by github-actions
  0

• Add GA test for bbnorm

  #299 opened 10 months ago by erinyoung
  0

• Version check

  #303 opened 10 months ago by github-actions
  1

• Fix kraken2 classified and unclassified reads

  #300 opened 10 months ago by erinyoung
  1

• Version check

  #301 opened 10 months ago by github-actions
  1

• Add pango-collapse.txt

  #295 opened 10 months ago by erinyoung
  1

• Version check

  #297 opened 10 months ago by github-actions
  1

• Version check

  #293 opened a year ago by github-actions
  1

• Version check

  #290 opened a year ago by github-actions
  0

• Version check

  #287 opened a year ago by github-actions
  1

• Version check

  #284 opened a year ago by github-actions
  1

• Version check

  #281 opened a year ago by github-actions
  0

• Nextclade will break workflow on January 16

  #279 opened a year ago by erinyoung
  0

• Version check

  #277 opened a year ago by github-actions
  0

• Version check

  #275 opened a year ago by github-actions
  0

• sort csv files from heatcluster are missing

  #271 opened a year ago by erinyoung
  0

• bam files... everywhere

  #270 opened a year ago by erinyoung
  1

• Version check

  #273 opened a year ago by github-actions
  1

• Version check

  #268 opened a year ago by github-actions
  1