WGLab/CancerVar

Issues

• decode entries in Therap_list, Diag_list and Prog_list

  #26 opened 2 months ago by kythol
  0

• Error: can't read the LOF genes file cancervardb/LOF.genes.exac_me_cancers

  #25 opened 3 months ago by ajain195
  1

• how to update cancervar.out.txt

  #24 opened 3 months ago by xiechangxiao
  0

• Error of opai_predictor.py using evidence-based model

  #23 opened 10 months ago by kakyungkim
  2

• override default databases with Annovar

  #22 opened 2 years ago by zoeward-nz
  0

• Overide default db Annovar

  #21 opened 2 years ago by zoeward-nz
  0

• cancervardb/ for hg38

  #20 opened 2 years ago by zoeward-nz
  2

• Invalid parameter in configuration file

  #19 opened 2 years ago by user-tq
  0

• choose the only one transcript for exonic variants

  #18 opened 2 years ago by user-tq
  0

• 5 prediction tools are used instead of 7

  #17 opened 2 years ago by jud-b
  0

• Tail end error on CancerVar.py

  #16 opened 2 years ago by bgold04
  2

• https://cancervar.wglab.org/databases/ cant be reached

  #8 opened 3 years ago by Bicyclecardcn
  3

• error using model ensemble

  #15 opened 2 years ago by evelingonzalezfeliu
  0

• The input format for CNA data in command-line CancerVar

  #10 opened 3 years ago by lincj1994
  2

• Is it correct to assign EVS5=1 and EVS5=0 to all the variants if I know they are somatic?

  #14 opened 3 years ago by lincj1994
  0

• Question about CBP10 in CancerVar web server.

  #13 opened 3 years ago by lincj1994
  1

• Can I assign a score of 1 to all variants if I know they are somatic?

  #12 opened 3 years ago by lincj1994
  0

• Issue about the VAF and Germline Variants (CBP5 and CBP6).

  #11 opened 3 years ago by lincj1994
  0

• Difference between CancerVar and InterVar?

  #9 opened 3 years ago by lincj1994
  9

• Where can I obtain hg38_icgc21.txt?

  #1 opened 4 years ago by CPTPaso
  7

• Database customization

  #7 opened 3 years ago by ashpsnair
  0

• difference between CancerVar and VIC?

  #6 opened 4 years ago by argoat
  5

• The PVS1.LOF.genes is incorrectly named

  #2 opened 4 years ago by ftucos
  1

• Missing files in cancervardb

  #4 opened 4 years ago by ftucos
  3

• Remove unneeded spaces in the header

  #5 opened 4 years ago by ftucos
  0

• Unrecognized character in orpha.txt

  #3 opened 4 years ago by ftucos
  1