Winnie09/Lamian

Issues

• Trouble running Lamian using UMAP embeddings

  #31 opened 2 months ago by DavidJDeGeorge
  1

• Add lapply to your mykmeans function

  #29 opened 5 months ago by Alexis-Varin
  2

• Error in tcrossprod(x, y) : requires numeric/complex matrix/vector arguments

  #27 opened 7 months ago by MartaSanchezCarbonell
  5

• Only group 0 and 1 works?

  #22 opened 8 months ago by wJDKnight
  1

• saveh5 running for very long time

  #17 opened a year ago by mehtar1
  2

• Expected runtimes for XDE/TDE test?

  #28 opened 6 months ago by DanielYuhangLi
  2

• Can Lamian handle the reduced one-sample case?

  #19 opened 10 months ago by szcf-weiya
  3

• remotes::install_github fails

  #24 opened 6 months ago by yesitsjess
  3

• Ordering samples before running branchPropTest() function

  #23 opened 7 months ago by ismailelshimy
  0

• Failing when running lamian_test with permutation: Error: $ operator is invalid for atomic vectors

  #11 opened a year ago by nickilott
  2

• 'chol2inv': not positive definite

  #16 opened a year ago by chooliu
  12

• How to visualize the results of TCD, XCD

  #21 opened 8 months ago by liyongzheng1
  0

• Error in as.igraph.vs(graph, to) : Invalid vertex name(s) in infer_tree_structure

  #18 opened 10 months ago by YiZh2019
  6

• Does it apply to a more complex design?

  #20 opened 9 months ago by zlin-bioinfo
  0

• Error when running Lamian on UMAP dimensions

  #9 opened 10 months ago by HumzaHemani
  1

• color palette in plotXDEHm

  #15 opened a year ago by resabut
  1

• getPopulationFit() return

  #13 opened a year ago by flde
  3

• pertumation/chisq issue

  #8 opened 3 years ago by xzsword
  1

• Error: result would be too long a vector When running the codes on the tutorial

  #14 opened a year ago by wuyiying2018
  1

• TDE and XDE tests with pseudotime data from other tools

  #7 opened a year ago by pchiang5
  2

• Error in if (is.numeric(v) && any(v < 0)) { : missing value where TRUE/FALSE needed

  #5 opened a year ago by pgugger
  1

• Error in chol.default

  #2 opened 2 years ago by grenkoca
  8

• Error: The 'x' data must be in the range 0 to 9.99856e-07 - lamian_test

  #12 opened 2 years ago by Sayyam-Shah
  0

• Can I use Seurat objects as the inputs?

  #10 opened 2 years ago by hjp34
  1

• XDE clusters' difference

  #6 opened 3 years ago by xzsword
  2

• Each p-value from branchPropTest() is 1

  #4 opened 3 years ago by jmitchell81
  1

• 'mc.cores' > 1 is not supported on Windows error with infer_tree_structure()

  #3 opened 3 years ago by jmitchell81
  2

• Lamian test

  #1 opened 3 years ago by ylxing001
  6