Zymo-Research/figaro

Issues

• Create a new release

  #57 opened a year ago by bernt-matthias
  1

• WIsh list for Figaro2

  #67 opened 4 months ago by hjarnek
  0

• NovaSeq quality profiles - Any issues with Figaro?

  #66 opened 5 months ago by andrebolerbarros
  0

• Could not infer read orientation from filename

  #48 opened 3 years ago by ekgough
  10

• Unknown error

  #65 opened 5 months ago by carordc
  0

• Installation error, ImportError: cannot import name '__version__' from 'figaro' (unknown location)

  #64 opened 5 months ago by maringa780
  0

• ImportError during Figaro running

  #60 opened a year ago by luigallucci
  3

• Module error

  #61 opened 9 months ago by alienzj
  3

• Handling variable length reads and pre-trimmed primers

  #17 opened 5 years ago by michael-weinstein
  8

• Forward reads appear to not be of consistent length

  #38 opened 4 years ago by BirongZhang
  6

• there does not seem to be a file called `bdist_wheel` anywhere

  #59 opened a year ago by antonkratz
  0

• when to apply trimming parameters

  #52 opened 2 years ago by smzt
  1

• Installed successfully but command line doesn't work

  #58 opened a year ago by WJH58
  0

• Fails due to inconsistent read lengths

  #14 opened 5 years ago by dude-meister
  7

• Error installing FIGARO

  #56 opened 2 years ago by jibarozzo
  0

• Value error setting an array with a sequence Fastq - 16s

  #55 opened 2 years ago by jayramr
  0

• Update on using Figaro with variable read lengths

  #54 opened 2 years ago by sreejata-b
  1

• ValueError occuring when inputing v3-v4 .fastq files

  #53 opened 2 years ago by elishafreedman
  0

• AttributeError: module 'collections' has no attribute 'Iterable'`

  #50 opened 2 years ago by msubirana
  2

• Possible Migration

  #51 opened 3 years ago by michael-weinstein
  2

• Unable to validate fastq files enough to perform this operation

  #49 opened 3 years ago by ekgough
  2

• Cannot run from command line

  #9 opened 5 years ago by jfq3
  5

• Errors unsing figaro with v3-v4 sequencing file MiSeq

  #37 opened 4 years ago by vehamel
  15

• FASTQ naming scheme

  #21 opened 4 years ago by zhonglinma
  3

• naming standards

  #47 opened 3 years ago by nick-youngblut
  0

• Plots for expected error values

  #46 opened 3 years ago by liuyu724
  0

• Figaro Version

  #45 opened 3 years ago by dot4822
  0

• Output results recommendation for DADA2

  #40 opened 4 years ago by mentorwan
  3

• branch: variableLengthReads

  #44 opened 3 years ago by cschu
  0

• sequence includes barcodes

  #41 opened 3 years ago by Xinming9606
  1

• Oriented sequence

  #42 opened 3 years ago by wyanren
  2

• Running figaro fails on 16S V4 data

  #36 opened 4 years ago by dean0358
  10

• question about figaro outputs

  #39 opened 4 years ago by mlin2017
  0

• Issue running figaro with 16S V4 data

  #35 opened 4 years ago by pig-raffles
  5

• read-specific maxExpectedError and trim length

  #33 opened 4 years ago by akhst7
  6

• highest score is negative

  #34 opened 4 years ago by adamsorbie
  4

• Only one sample is running

  #32 opened 4 years ago by aureliendejode
  2

• Incorrectly added lines and enchancement idea

  #25 opened 4 years ago by przemekiljan
  3

• Forward read files appear to be of different lengths or of varied lengths.

  #30 opened 4 years ago by weibokong27
  1

• Question about the scoring method of FIGARO

  #28 opened 4 years ago by 5uperb0y
  2

• non overlapping reads

  #23 opened 4 years ago by nomascus
  2

• missing nameless outputs

  #27 opened 4 years ago by handibles
  2

• Figaro crashing

  #20 opened 4 years ago by jarrodscott
  5

• Figaro stops at some point

  #22 opened 4 years ago by termithorbor
  3

• ImportError trying to run figaro

  #31 opened 4 years ago by elpape
  1

• Before or after cutadapt?

  #18 opened 4 years ago by Aircus
  2

• ERROR in figaro

  #15 opened 4 years ago by MrX-NGS
  3

• different read length due to different barcode length

  #16 opened 4 years ago by fairquestion
  4

• Do we have to use "synced" R1 and R2 files?

  #13 opened 4 years ago by vrbacky
  8

• Running from command line fails when /data doesn't exist

  #7 opened 5 years ago by calpan
  4