Pinned Repositories
AB-Genotypes-to-ATGC-Illumina
Python script to convert AB genotypes to ATGC for illumina arrays
AdventOfCode2018
Solutions to the 2018 adventofcode at https://adventofcode.com/
AutoPCA_Match
Auto Matching of cases and controls by principal components
awesome-public-datasets
An awesome list of high-quality open datasets in public domains (on-going). By everyone, for everyone!
FASTQ_to_FASTA
A python script to convert FASTQ to FASTA
get_common_snps
This python script will take 2 or more snplists as created by PLINK --write-snplist and create a list with common snps found across all the list
plinkMerge
hibagPred
imputePipeline
peptMaker
adiamb's Repositories
adiamb/Decombinator
Decombinator v3: fast, error-correcting analysis of TCR repertoires
adiamb/openpilot
open source driving agent
adiamb/neo
comma neo research platform
adiamb/web_scraper_live_demo
This is the code for the "Build a Web Scraper" Live stream by @Sirajology on Youtube
adiamb/dataset-examples
Samples for users of the Yelp Academic Dataset
adiamb/sklearn_tutorial
Materials for my scikit-learn tutorial
adiamb/scikit-learn
scikit-learn: machine learning in Python
adiamb/mvp_aaa_codelabs
Queries to perform qc and analysis on genomes in BigQuery
adiamb/le_python
Logentries support for Python
adiamb/GithubOriginalStreak
Extension to get back current and longest streak. Original version :star: No libraries :zap: All Browsers :boom:
adiamb/carvaluation
adiamb/mhc_experiments
adiamb/tcr-analysis
Scripts and files that I use to analyse T cell receptor repertoire data, produced by deep-sequencing
adiamb/evachan.org-Rscripts
Handy genetics-related R scripts
adiamb/DataScienceR
a curated list of R tutorials for Data Science, NLP and Machine Learning
adiamb/FLASH2
Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for amplicons
adiamb/snpflip
Report reverse and ambiguous strand SNPs in GWAS data
adiamb/keras
Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano and TensorFlow.
adiamb/impute-pipe
:shower: Canonical SGE cluster genotype imputation pipeline
adiamb/Twitter-HotTrends
adiamb/modeligem
Modeling and Bioinformations for iGEM Brasil-USP (2015)
adiamb/biopython
Official git repository for Biopython (converted from CVS)
adiamb/zCall
A Rare Variant Caller for Array-based Genotyping
adiamb/JOINing-Data-with-R-data.table
How to perform the different types of SQL-JOINs in R using data.table
adiamb/titanic
Getting Started With R
adiamb/cracking-the-coding-interview
Python solutions for the book Cracking the Coding Interview