adomingues

adomingues's Stars

• Rdatatable/data.table

  R's data.table package extends data.frame:

  Language:R3.6k1744.5k986

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

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• BlakeRMills/MetBrewer

  Color palette package in R inspired by works at the Metropolitan Museum of Art in New York

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• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

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• GuangchuangYu/hexSticker

  :sparkles: Hexagon sticker in R

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• AllanCameron/geomtextpath

  Create curved text paths in ggplot2

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• MattCowgill/ggannotate

  Interactively annotate ggplots

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• duo-labs/markdown-to-confluence

  Syncs Markdown files to Confluence

  Language:Python3089968

• seabbs/cv

  Sam Abbott's Curriculum Vitae

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• BIMSBbioinfo/compgen2021

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• StatsGary/MLDataR

  A collection of Machine Learning datasets for health care and beyond

  Language:R52679

• eQTL-Catalogue/qtlmap

  Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

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• nf-core/rnasplice

  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

  Language:Nextflow451505025

• olihawkins/tabbycat

  An R package for tabulating and summarising categorical variables.

  Language:R34200

• palantir/palantir-python-sdk

  Palantir Python SDK

  Language:Python34204710

• holtzy/data_analysis_website

  Make your data science report a website. In 10 minutes.

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• frictionlessdata/frictionless-r

  R package to read and write Frictionless Data Packages

  Language:R29816111

• hasaru-k/GlimmaV2

  interactive plots for differential expression analysis

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• sa-lee/superintronic

  A tidy interface for coverage analysis

  Language:R24333

• INWTlab/rsync

  R Package as interface to rsync

  Language:R17654

• palantir/palantir-r-sdk

  Palantir R SDK

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• BIMSBbioinfo/deconvR

  The deconvR is an R package designed for analyzing deconvolution of the bulk sample(s) using an atlas of reference omic signature profiles and a user-selected model.

  Language:R1013173

• johanneskoester/awesome-single-cell

  List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

  10302

• CogDisResLab/drugfindR

  Repository holding the code for the drugfindR R package

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• pietrofranceschi/Physalia_ML

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• baptiste/ganttrify

  Create beautiful Gantt charts with ggplot2

  Language:R3001

• nmclark2/TMT-NEAT

  Tandem Mass Tag Normalization, Expression Analysis, and statistical Testing

  Language:R2123

• slebedeva/CLIP_mapping

  a pipeline to map CLIP-seq data

  Language:Python2300

• ohlerlab/omniCLIP

  omniCLIP is a CLIP-Seq peak caller

  11

• slebedeva/omniCLIP

  omniCLIP is a CLIP-Seq peak caller

  Language:Python1100