ahwagner
Asst. Prof. at Nationwide Children's Hospital and Ohio State University. My focus is on understanding genomic variants and their clinical implications.
Nationwide Children's HospitalColumbus, OH
Pinned Repositories
biocommons.seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
ff_gen
A library for pseudorandom generation of Fantasy Football draft orders and schedules
hgvstools
A toolkit for working with HGVS variants
sclc
Relapsed SCLC Project Analysis and Reference files
vicckb
python module for querying the vicc knowledgebase integration datastore
metakb
Central repository for the VICC metakb web application
dgidb
Rails frontend to The Genome Institute's drug gene interaction database.
vrs
Extensible specification for representing and uniquely identifying biological sequence variation
civic-server
Backend Server for CIViC Project
civicpy
A python interface for the CIViC db application
ahwagner's Repositories
ahwagner/vicckb
python module for querying the vicc knowledgebase integration datastore
ahwagner/biocommons.seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
ahwagner/ff_gen
A library for pseudorandom generation of Fantasy Football draft orders and schedules
ahwagner/ahwagner.github.io
ahwagner/alex-utils
ahwagner/ave-dcd.github.io
ahwagner/biocommons.github.io
biocommons website
ahwagner/compbio-edi
Curated summary of efforts to promote equity, diversity, and inclusion in computational biology PhD programs and societies.
ahwagner/cv-latex
My CV
ahwagner/FantasyFootballScheduleAnalyzer
Python script for analyzing the effect your fantasy schedule has on the league standings
ahwagner/ga4gh-gks.github.io
GA4GH Genomic Knowledge Standards
ahwagner/griffithlab.org
Griffith lab research website
ahwagner/hackathon.guide
A logistics guide to running a successful hackathon.
ahwagner/linkml
Linked Open Data Modeling Language
ahwagner/metakb
central repository for the VICC metakb web application
ahwagner/ohdsi_variants
extraction of variant concepts from the VICC metaKB
ahwagner/phenopacket-schema
Repository for the GA4GH inlined phenopacket schema
ahwagner/phenopacket-tools
Java CLI and library for creating, converting and validating GA4GH Phenopackets
ahwagner/python-kasa
🏠🤖 Python API for TP-Link Kasa Smarthome products
ahwagner/reusabledata
The home repository for the (Re)usable Data Project.
ahwagner/scipy
Scipy library main repository
ahwagner/sphinxjp.themes.basicstrap
Theme for Sphinx using Twitter Bootstrap
ahwagner/tplink-smartplug
TP-Link WiFi SmartPlug Client and Wireshark Dissector
ahwagner/UZH-BIO390
Universität Zürich - “Introduction to Bioinformatics” Lecture Series
ahwagner/variant-name-classifier
A simple tokenizer and classifier of CIViC and OncoKB variant terms
ahwagner/VarNomen
ahwagner/vr-python
GA4GH Variation Representation Python Implementation
ahwagner/vrs
Extensible specification for representing and uniquely identifying biological sequence variation
ahwagner/vrs-manuscript
ahwagner/YOURLS
đź”— Your Own URL Shortener