alermol

alermol's Stars

• cxli233/FriendsDontLetFriends

  Friends don't let friends make certain types of data visualization - What are they and why are they bad.

  Language:R6.5k1147248

• friuns2/BlackFriday-GPTs-Prompts

  List of free GPTs that doesn't require plus subscription

  5.9k10679918

• xflux-gui/fluxgui

  Better lighting for Linux. Open source GUI for xflux

  Language:Python2.8k59138176

• MilesCranmer/PySR

  High-Performance Symbolic Regression in Python and Julia

  Language:Python2.5k32233217

• TalalAlrawajfeh/mathematics-roadmap

  A Comprehensive Roadmap to Mathematics

  2.2k516197

• broadinstitute/gatk

  Official code repository for GATK versions 4 and up

  Language:Java1.7k1534.6k594

• erikgahner/awesome-ggplot2

  A curated list of awesome ggplot2 tutorials, packages etc.

  1.6k4715169

• bernatgel/karyoploteR

  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

  Language:R299715642

• Boyle-Lab/Blacklist

  Application for making ENCODE Blacklists

  Language:C++27484139

• lh3/gfatools

  Tools for manipulating sequence graphs in the GFA and rGFA formats

  Language:C214173321

• lastz/lastz

  Program for aligning DNA sequences, a pairwise aligner.

  Language:C200105837

• noamross/gam-resources

  19112128

• inab/trimal

  A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

  Language:C++179117041

• Benson-Genomics-Lab/TRF

  Tandem Repeats Finder: a program to analyze DNA sequences

  Language:C15562726

• PacificBiosciences/trgt

  Tandem repeat genotyping and visualization from PacBio HiFi data

  Language:Rust10730469

• cpockrandt/genmap

  GenMap - Fast and Exact Computation of Genome Mappability

  Language:C++10032918

• snugel/cas-offinder

  An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.

  Language:C++8653727

• alexpreynolds/sample

  Performs memory-efficient reservoir sampling on very large input files delimited by newlines

  Language:C697512

• harvardinformatics/degenotate

  Language:Python417224

• hoffmangroup/umap

  Language:Python245212

• morisUtokyo/mTR

  tandem repeat finding from erroneous long reads

  Language:C15135

• haplotype/ELAI

  Efficient Local Ancestry Inference

  Language:C++11211

• liguowang/cpat

  Coding-Potential Assessment Tool using an alignment-free logistic regression model

  Language:Python100104

• Iuliana-Ionita-Laza/QRGWAS

  Language:R6100

• maxgmarin/pupmapper

  A tool for calculation of pileup mappability for any genome of interest.

  Language:Python4100

• sandeshsth/SkimSeq_Method

  Language:Shell4101

• WGS-TB/SplitStrains

  Language:Jupyter Notebook4653

• morisUtokyo/cTR

  Clustering reads with tandem repeats from the same locus

  Language:C310

• phuoc362/Lifted

  lifted

  Language:Shell3121

• TanyaDvorkina/sdpaper

  Scripts for testing String Decomposition Problem solutions

  Language:Python2100