alhashimilab

The lab of Hashim Al-Hashimi at Duke Univeristy

Duke UniversityDuke University Medical Center

Pinned Repositories

1H-CEST
Language:Python0 0 00
ABG_calc
Language:Python0 0 00
AG-Simulation
Language:Python0 1 00
alhashimilab.github.io
Language:JavaScript00
BMNS
Bloch-McConnell Numerical Simulation - Fitting and Plotting
Language:Python0 0 00
Ensemble
All experimentally determined dynamic ensembles from Al-Hashimi lab
Language:Python1 1 00
RDC
All NMR RDCs used for determination of ensemble
1 1 00
RNA-DNA-Hybrids
G-T/U mismatch dynamics in RNA-DNA hybrids
Language:Python10
TAR_Thermodynamic_Model
Language:Jupyter Notebook1 1 00
TF_MM
Language:Python1 0 02

alhashimilab's Repositories

alhashimilab/Ensemble
All experimentally determined dynamic ensembles from Al-Hashimi lab
Language:Python1 1 00
alhashimilab/RDC
All NMR RDCs used for determination of ensemble
1 1 00
alhashimilab/RNA-DNA-Hybrids
G-T/U mismatch dynamics in RNA-DNA hybrids
Language:Python10
alhashimilab/TAR_Thermodynamic_Model
Language:Jupyter Notebook1 1 00
alhashimilab/TF_MM
Language:Python1 0 02
alhashimilab/1H-CEST
Language:Python0 0 00
alhashimilab/ABG_calc
Language:Python0 0 00
alhashimilab/AG-Simulation
Language:Python0 1 00
alhashimilab/alhashimilab.github.io
Language:JavaScript00
alhashimilab/BMNS
Bloch-McConnell Numerical Simulation - Fitting and Plotting
Language:Python0 0 00
alhashimilab/CanonicalBP
A comprehensive PDB database of canonical WC base pair in DNA and RNA
Language:Python
alhashimilab/delta-melt-data
Language:Python0 0
alhashimilab/Disprun
Disprun3 - 1D R1rho peak fitting, error estimation, experimental setup program
Language:Python0 0
alhashimilab/Hoog-Finder
Language:Python1 0
alhashimilab/HoogsteenInTheData
all the DNA structural models rebuilt and refined with Hoogsteen bps from Al-Hashimi lab
1 0
alhashimilab/imino1Hexchange
Language:Python0 0
alhashimilab/InteractiveProfiles
Interactive profiles for NMR peak lineshape and RD (R1rho) profiles
Language:Python0 0
alhashimilab/Kinetically_resolved_ensemble_TAR
Data / Analysis for paper on kinetically resolved ensemble for TAR
Language:Jupyter Notebook1 0
alhashimilab/KineticSimulations
Language:Python0 0
alhashimilab/m6A_ES
1 01
alhashimilab/m6A_hybridization_kinetics
Language:Jupyter Notebook0 0
alhashimilab/MismatchPDB
A comprehensive PDB database of all DNA/RNA base pairs
Language:Python0 0
alhashimilab/PySAS
Python script of sample and select for ensemble determination
Language:C++1 0
alhashimilab/RAMAH
Language:Python0 0
alhashimilab/RNAJunction
A comprehensive PDB database of 2-way junction inter-helical angles.
Language:Python0 01
alhashimilab/Singly_HB_AU
PDB survey for Singly H-bond AU bps in the PDB
Language:Jupyter Notebook0 0
alhashimilab/TAR_ES2_ensemble
Open source resources / raw data for manuscript : An RNA excited conformational state at atomic resolution
Language:Python1 0
alhashimilab/UV_melting
Language:Python1 0