aramis-lab/clinicadl

Issues

• Support Python 3.12

  #664 opened 3 months ago by NicolasGensollen
  0

• Path object is actually a string

  #668 opened 3 months ago by thibaultdvx
  0

• MapsManager uses a different CAPS folder in predict than the one provided by the user

  #591 opened 7 months ago by NicolasGensollen
  3

• File format not BIDS compliant

  #538 opened 9 months ago by thibaultdvx
  0

• TypeError: can only concatenate str (not "PosixPath") to str

  #543 opened 9 months ago by thibaultdvx
  0

• get-progression turns 2-digits session labels to 3 digits

  #539 opened 9 months ago by thibaultdvx
  1

• No Hippocampus Mask Available/Compatible

  #537 opened 10 months ago by naji-s
  3

• Use `parent` or `parents` attributes of Pathlib Path object instead of chaining ".." strings

  #532 opened 10 months ago by NicolasGensollen
  0

• Documentation copyright is outdated

  #531 opened 10 months ago by NicolasGensollen
  0

• Use `setdefault()` method instead of looping over default dict

  #533 opened 10 months ago by NicolasGensollen
  0

• Clarification needed on `TSV_DIRECTORY` for Training after using `prepare-experiment`

  #527 opened 10 months ago by souravraha
  2

• Expanding Modality Support for ML Classification in ClinicaDL

  #515 opened a year ago by souravraha
  1

• Running predict with --overwrite delete the results on all the splits

  #456 opened a year ago by ravih18
  0

• Add option to save model for each epochs

  #506 opened a year ago by camillebrianceau
  0

• T1-Volume quality check tsv are empty

  #491 opened a year ago by MatthieuJoulot
  0

• Clinica T1-Linear Pipeline Fails: FileNotFoundError for 'bias_image' in N4BiasFieldCorrection Node

  #494 opened a year ago by mtmmu88
  4

• Subject: Inquiry on Using Pre-trained Models for Transfer Learning with ClinicaDL

  #476 opened a year ago by mtmmu88
  7

• Requirement for 'diagnosis' Column in Generalization Testing with ClinicaDL

  #481 opened a year ago by mtmmu88
  1

• Retrocompatibility problem with maps.json

  #478 opened a year ago by camillebrianceau
  0

• Issue with Limited Number of Samples in BIDS Conversion Using ClinicaDL

  #480 opened a year ago by mtmmu88
  0

• categorical split variable flag

  #471 opened a year ago by mselimata
  1

• unsupported operand type(s) for +=: 'PosixPath' and 'str'

  #469 opened a year ago by mtmmu88
  5

• data augmentation issues

  #466 opened a year ago by mselimata
  1

• clinicadl tsvtools analysis error

  #454 opened a year ago by mselimata
  6

• Training with rois RuntimeError: Trying to resize storage that is not resizable

  #441 opened 2 years ago by mselimata
  1

• Issue With Installation for ANTS

  #452 opened 2 years ago by J-V1
  1

• clinicadl tsvtools get-labels not forming the merged.tsv file automatically

  #435 opened 2 years ago by mselimata
  1

• TypeError: _get_tsv_paths() got an unexpected keyword argument 'split'

  #438 opened 2 years ago by mselimata
  0

• KeyError: 'CN'

  #440 opened 2 years ago by mselimata
  0

• Add tensor_extraction folder in synthetic CAPS.

  #382 opened 2 years ago by camillebrianceau
  0

• Problem with the order of commands for `get-labels` and `get-progression`

  #406 opened 2 years ago by camillebrianceau
  1

• Issue with `get-labels` when finding the output of `clinica iotools missing-modalities`

  #421 opened 2 years ago by 14thibea
  1

• remove possibility to load data in the `ressources` folder

  #370 opened 2 years ago by camillebrianceau
  0

• New command to get metadata

  #316 opened 2 years ago by ravih18
  0

• Simplify `split` and `kfold`

  #314 opened 2 years ago by ravih18
  0

• Problem with poetry install

  #371 opened 2 years ago by msolal
  1

• Remove access to the web server

  #366 opened 2 years ago by camillebrianceau
  1

• Vulnerability in PyTorch until release 1.13.1

  #358 opened 2 years ago by NicolasGensollen
  1

• Quality check

  #355 opened 2 years ago by acasamitjana
  2

• Rename preprocessing commands

  #313 opened 2 years ago by ravih18
  0

• Remove restrict command from tsvtools

  #310 opened 2 years ago by ravih18
  0

• Change `diagnosis` into `group` and `subgroup`

  #311 opened 2 years ago by ravih18
  0

• Merge `getlabels` output into a unique TSV

  #312 opened 2 years ago by ravih18
  0

• Enhance `analysis` command

  #317 opened 3 years ago by ravih18
  0

• Problem with patch and slices when images are not in the CAPS

  #345 opened 2 years ago by ravih18
  0

• Change acquisition label to tracer in command line

  #325 opened 2 years ago by camillebrianceau
  0

• Add references to doc

  #329 opened 2 years ago by ravih18
  0

• Optimize the use of Pandas

  #315 opened 3 years ago by ravih18
  0

• Fix list_models function

  #331 opened 2 years ago by camillebrianceau
  1

• Add new SOTA models

  #330 opened 2 years ago by ravih18
  0