atakehiro

2D_registration

registration of time-lapse imaging data

3D-U-Net-pytorch-model-parallel

PyTorch implementation of 3D U-Net with model parallel in 2GPU for large model

3D-U-Net-TFLMS-Keras

3D U-Net with tf.keras for Large-Model-Support or Unified Memory

3D_GUI_Viewer

GUI tool for 3D view of stack image

3D_registration

registration for time-lapse slipping of 3D image

Brian2_neuron-astrocyte_simulation

Simulation of neuron-astrocyte network with Brian 2

Brian2_SNN_practice

Implementation of Spiking Neural Network with Brian 2

GUI_ROI_tool

the GUI tool for taking a region of interest (ROI) from a fluorescence image

Neural_Decoding_from_Calcium_Imaging_Data

Neural_Simulator-Colab

Demo code of neural simulators for Google Colab

atakehiro/3D-U-Net-pytorch-model-parallel

PyTorch implementation of 3D U-Net with model parallel in 2GPU for large model

atakehiro/Neural_Simulator-Colab

Demo code of neural simulators for Google Colab

atakehiro/3D-U-Net-TFLMS-Keras

3D U-Net with tf.keras for Large-Model-Support or Unified Memory

atakehiro/Brian2_neuron-astrocyte_simulation

Simulation of neuron-astrocyte network with Brian 2

atakehiro/Brian2_SNN_practice

Implementation of Spiking Neural Network with Brian 2

atakehiro/GUI_ROI_tool

the GUI tool for taking a region of interest (ROI) from a fluorescence image

atakehiro/Neural_Decoding_from_Calcium_Imaging_Data

atakehiro/2D_registration

registration of time-lapse imaging data

atakehiro/3D_GUI_Viewer

GUI tool for 3D view of stack image

atakehiro/3D_registration

registration for time-lapse slipping of 3D image

atakehiro/CaSCaDe

Code for CaSCaDe

atakehiro/Cell_Splitter

Extract regions of the cells from binary image(2D or 3D) and coordinates of the cells

atakehiro/line-registration

reconstruct the scan image to modify the slipping to horizontal direction

atakehiro/Stack_registration

registration of multi stack movies to one movie

atakehiro/TurboReg_macro

macro code for advanced usage of TurboReg (ImageJ plugin)