avsmith

avsmith's Stars

• ashishpatel26/500-AI-Machine-learning-Deep-learning-Computer-vision-NLP-Projects-with-code

  500 AI Machine learning Deep learning Computer vision NLP Projects with code

  20.6k604555.2k

• meirwah/awesome-workflow-engines

  A curated list of awesome open source workflow engines

  6.5k23129639

• Bogdanp/awesome-advent-of-code

  A collection of awesome resources related to the yearly Advent of Code challenge.

  2.9k2925884

• bigdatagenomics/adam

  ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

  Language:Scala1k1001.2k309

• RILAB/statements

  Successful Job Applications and Grants

  699691128

• brentp/cyvcf2

  cython + htslib == fast VCF and BCF processing

  Language:Cython382721572

• SonarSonic/DrawingBotV3

  DrawingBotV3 is a software for converting images into vector art

  Language:Java3621810845

• luke14free/pm-prophet

  GAM timeseries modeling with auto-changepoint detection. Inspired by Facebook Prophet and implemented in PyMC3

  Language:Python328182842

• fuglede/adventofcode

  Python solutions to Advent of Code puzzles, https://adventofcode.com/

  Language:Python961058

• PMBio/peer

  A factor analysis package

  Language:C++9511038

• darwinanddavis/worldmaps

  Language:HTML827011

• statgen/Minimac4

  Language:C++56117219

• arknave/advent-of-code-2020

  ASCII art of digits that also happen to solve Advent of Code challenges

  Language:Python501111

• fauman/EGEA

  Every Gene Ever Annotated in published GWAS

  47314

• OpenMendel/MendelImpute.jl

  OpenMendel package for haplotyping and imputation

  Language:Julia24371

• h3abionet/chipimputation

  Genotype Imputation Pipeline for H3Africa

  Language:Nextflow20111520

• hoffmangroup/acidbio

  Language:Python14121

• AndreaRubbi/Set-Cover-problem-solution-Python

  Python implementation of the 'Greedy' and 'Branch and Bound' algorithms to resolve the Set Cover problem

  Language:Python11202

• genepi/imputationserver2

  Language:Nextflow93

• auerlab/vcf-split

  Split combined-sample VCF stream into single-sample VCF files

  Language:C8281

• StoreyLab/bnpsd

  R package to model and simulate admixed populations

  Language:R8400

• thiagonds65/nbib2bib

  nbib to bib converter

  Language:Python7114

• julian-west/adventofcode

  Advent of code solutions

  Language:Python6101

• ga4gh/human-pangenome-project

  Human Pangenome Project

  5613

• mklarqvist/pil

  Language-independent and schema-agnostic columnar memory format for genomics data

  Language:C++5402

• statgen/imputationserver

  TOPMED Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

  Language:Java5208

• auerlab/TOPMed-mCA

  Haplohseq analysis of TOPMed data

  Language:Shell2301

• bogdanlab/admixed_genotype_simulation

  A Snakemake pipeline for simulating genotypes for admixed population

  Language:Python20

• eduardoapgomes/pubmed_pmid_to_bibtex_scraper

  PubMed BibTeX Scraper: A web scraping tool that reads a list of PMIDs from PubMed and returns a file with corresponding BibTeX data

  Language:Python2

• jeromekelleher/ga4gh-variant-sim

  Simulations for benchmarking large-scale variant stores

  Language:Python1423