benzwick

benzwick's Stars

• all-contributors/all-contributors

  ✨ Recognize all contributors, not just the ones who push code ✨

  Language:HTML7.7k802611.7k

• opentrack/opentrack

  Head tracking software for MS Windows, Linux, and Apple OSX

  Language:C++3.8k1601.6k461

• kakoni/awesome-healthcare

  Curated list of awesome open source healthcare software, libraries, tools and resources.

  2.8k16326373

• AIM-Harvard/pyradiomics

  Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

  Language:Jupyter Notebook1.2k47554500

• nipy/nipype

  Workflows and interfaces for neuroimaging packages

  Language:Python752511.4k530

• OpenBCI/OpenBCI_GUI

  A cross platform application for the OpenBCI Cyton and Ganglion. Tested on Mac, Windows and Ubuntu/Mint Linux.

  Language:HTML73655544258

• ThomasYeoLab/CBIG

  Language:MATLAB6135255390

• metriport/metriport

  Metriport is an open-source universal API for healthcare data.

  Language:JavaScript532623959

• visit-dav/visit

  VisIt - Visualization and Data Analysis for Mesh-based Scientific Data

  Language:C452255.4k117

• openlists/ElectrophysiologyData

  A list of openly available datasets in (mostly human) electrophysiology.

  40136968

• BBillot/SynthSeg

  Contrast-agnostic segmentation of MRI scans

  Language:Python38988799

• licht1stein/obsidian.el

  Obsidian Notes for Emacs

  Language:Emacs Lisp38863529

• MIC-DKFZ/HD-BET

  MRI brain extraction tool

  Language:Python297114766

• InsightSoftwareConsortium/ITKElastix

  An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

  Language:Python2172312823

• AIM-Harvard/SlicerRadiomics

  A Slicer extension to provide a GUI around pyradiomics

  Language:Python106224449

• ros-drivers/mocap_optitrack

  ROS nodes for working with the NaturalPoint Optitrack motion capture setup

  Language:C++1011646142

• PerkLab/PerkLabBootcamp

  Materials for the yearly PerkLab bootcamp course

  8620131

• SuperElastix/elastix-napari

  A napari plugin for itk-elastix

  Language:Python387118

• Kitware/paraview-visualizer

  Web frontend to ParaView based on trame

  Language:Python3341012

• SlicerRt/SlicerDebuggingTools

  Extension for 3D Slicer containing various tools for module development and debugging

  Language:Python2310157

• PerkLab/SlicerOpenAnatomy

  3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser

  Language:Python177136

• lassoan/SlicerHDBrainExtraction

  3D Slicer extension for accessing HD-BET brain extraction tool for skull stripping in brain MRI images.

  Language:Python15200

• lorifranke/SlicerTMS

  Extension in 3DSlicer for visualization of TMS

  Language:Python15787

• HOA-2/SlicerNeuroSegmentation

  NeuroSegmentation extension for 3D Slicer

  Language:Python144222

• mhalle/spl-brain-atlas

  Draft of the SPL Multi-modal brain atlas

  143011

• PerkLab/SlicerFreeSurfer

  This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.

  Language:C++137174

• IGSIO/SlicerIGSIO

  Utility extension for 3D Slicer, containing tools and algorithms for building image guided surgery applications

  Language:C++1271714

• casperdcl/brain_phantom

  3D continuous brain phantom

  Language:C++6

• KitwareMedical/SlicerIMSTK

  Extension for 3D slicer that enables user to prototype real-time multi-modal surgical simulation scenarios by leveraging iMSTK

  Language:CMake61195

• andy9t7/SlicerAtlasEditor

  This is a 3D Slicer extension for editing and simplifying The Open Anatomy Project's atlas labelmaps by anatomical groups.

  Language:Python1120