bjpop/rubra

Issues

• Rubra RedDog error

  #28 opened 6 years ago by vealvarez
  1

• Support SLURM job scheduler

  #17 opened 11 years ago by bjpop
  2

• Trouble install directly from pip

  #27 opened 8 years ago by burkesquires
  1

• example doesn't run out of the box

  #24 opened 11 years ago by AMChalkie
  1

• handling of full paths in command line

  #23 opened 11 years ago by AMChalkie
  0

• Make rubra more robust in the face of job errors

  #22 opened 11 years ago by bjpop
  0

• Use shlex.split to parse srun command line

  #21 opened 11 years ago by bjpop
  0

• Generate other image format types for flowchart

  #20 opened 11 years ago by bjpop
  0

• save a separate shell script for each submitted job

  #19 opened 11 years ago by bjpop
  0

• Allow config file to be in different directory to pipeline file

  #18 opened 11 years ago by bjpop
  0

• Investigate the use of DRMAA to submit jobs to clusters.

  #5 opened 12 years ago by bjpop
  2

• Allow module loading for non-distributed jobs

  #16 opened 11 years ago by claresloggett
  1

• Putting too many steps out of order results in an error that is not usually seen in Ruffus

  #15 opened 11 years ago by claresloggett
  0

• Make the pipeline a required argument and remove the --pipeline flag

  #12 opened 11 years ago by bjpop
  1

• Modules in the pipeline script's directory can't be imported when it is called via rubra

  #13 opened 11 years ago by claresloggett
  1

• Add an example pipeline that makes use of the config files

  #14 opened 11 years ago by claresloggett
  0

• Make the installed rubra package executable as a script from the user's path

  #7 opened 11 years ago by claresloggett
  2

• Add touchfiles as an option alongside print, run, flowchart

  #8 opened 11 years ago by claresloggett
  2

• The default of rebuild appears to actually be fromstart (which I would expect) ? But docs say it is fromend.

  #9 opened 12 years ago by claresloggett
  1

• Give Rubra a version number

  #3 opened 12 years ago by bjpop
  2

• Make Rubra an installable package in the normal Python way.

  #4 opened 12 years ago by bjpop
  1

• Perform checking of configuration options

  #2 opened 12 years ago by bjpop
  0