Issues
- 6
What is the plotting convention for the location of the delta bar in the viewer?
#70 opened by SophieCandille - 1
warn about and/or provide more info for insertion variants that may be affected by issue #67
#69 opened by bw2 - 1
Clarify which version of tensorflow is used
#75 opened by bpow - 4
- 1
Is masking working for this variant?
#59 opened by DELAMHACH - 5
- 1
Consider using PyVCF3 to avoid pinning setuptools
#74 opened by bpow - 1
Ensembl API is unable to parse the variant
#73 opened by cfcranston - 8
SpliceAI score issue
#72 opened by NYGHGenetics - 1
Issue with API Timeout Error
#71 opened by kaycho88 - 2
Flank distance maximum changed?
#68 opened by NM-G08 - 3
Missing certificate chain
#66 opened by Pacdam - 4
Unable to reach server
#65 opened by martbro - 2
API call failed
#64 opened by mikespiller1 - 2
Pangolin Installation
#63 opened by neilmolyneaux - 2
- 3
Cross-Origin Request Blocked
#61 opened by lindenb - 0
For hg19 variants, show hg19 versions of (or disable) the optional igv tracks (ie. GTEx, segdups, mappability)
#60 opened by bw2 - 2
Wrong file on annotations download site
#57 opened by jzluo - 7
Differing predictions for same sequence
#31 opened by NM-G08 - 11
Feature Request - Predictions for cryptic sites with no difference in score between ref and alt alleles
#30 opened by NM-G08 - 1
Type of site gained for Pangolin?
#56 opened by gm-bee - 3
Table layout
#55 opened by cmschwanke - 6
- 0
Pangolin scores are showing as negative values
#54 opened by gm-bee - 19
Container for your app
#51 opened by Manuel-DominguezCBG - 2
Linkouts under Pangolin results do not work
#48 opened by gm-bee - 1
- 1
Can I disable REDIS?
#49 opened by Manuel-DominguezCBG - 2
Annotation not loading
#50 opened by cmkoellner - 0
- 1
Interesting case that produces a disagreement between SpliceAI and ApliceAI lookup
#42 opened by Manuel-DominguezCBG - 1
Transcript Dependent Scores
#43 opened by officedronestrike - 1
Different results for RAD51D depending on whether we select hg19 or hg38, even though there are no differences in the numbering
#41 opened by AndreaHAPS - 1
- 0
Retire the use of precomputed scores
#36 opened by bw2 - 5
- 4
[Errno 2] No such file or directory: './annotations/gencode.v43lift37.annotation.txt.gz'
#38 opened by Manuel-DominguezCBG - 4
- 5
- 2
- 1
Site not working properly
#33 opened by NM-G08 - 4
different score for same variant
#29 opened by vasvale - 3
TET2 Cannonical transcript not selected
#28 opened by cpsosa0006 - 1
Duplicated data in spliceAI vcf
#27 opened by forrestzhaosen - 2
- 1
SpliceAI server appears to be down again.
#22 opened by Coovadia - 1
Server is down?
#23 opened by NM-G08 - 1
hg19 server seems to be down
#24 opened by elodiep-3483 - 2
server down
#25 opened by poppies700