brwnj/fastq-multx

Issues

• Demuxing dual-indexed, single-end fastq files with indexes in header fails

  #21 opened a year ago by rikrdo89
  5

• Demultiplexing from barcodes in headers

  #7 opened 6 years ago by jenzopr
  9

• memory issues

  #20 opened 2 years ago by Yyeserin
  6

• what does "Skipped because of distance < 2 : 9439859" means?

  #12 opened 3 years ago by kaine1973
  1

• int overflow when sample contains more reads than max int

  #18 opened 4 years ago by hepcat72
  2

• Tests 10-12 fail

  #15 opened 4 years ago by hepcat72
  2

• How to extract fastq files with the cell barcode still remained?

  #17 opened 4 years ago by vagabond12
  0

• Possible int overflow issue

  #14 opened 4 years ago by hepcat72
  3

• space in fastq header

  #13 opened 4 years ago by krejciadam
  1

• `gzip: stdout: Broken pipe`

  #11 opened 4 years ago by hepcat72
  0

• Request a tag/release of version 1.4

  #10 opened 4 years ago by lparsons
  1

• Usage suggests an option order that generates an error, no outputs, and exit code 0

  #9 opened 4 years ago by hepcat72
  2

• how to demultiplex dual index on paried end reads

  #3 opened 8 years ago by y9c
  13

• Length of Read1.fq file different from length of indexfile.fq

  #6 opened 7 years ago by Lufpa
  0

• headers in unmatched file

  #5 opened 7 years ago by willowsblade
  5

• Unmatch decision question

  #4 opened 8 years ago by Baboon61
  9

• Help message

  #1 opened 8 years ago by brwnj
  1