caravagnalab/nextflow_modules

Issues

• dnds

  #48 opened 4 months ago
  0

• Subclonal Deconvolution

  #44 opened 4 months ago
  0

• Variant Annotation

  #43 opened 4 months ago
  0

• Documentation

  #42 opened 4 months ago
  0

• Genome Interpreter subworkflow

  #41 opened 4 months ago
  0

• Final Report

  #40 opened 4 months ago
  0

• Driver Annotation subworkflow

  #39 opened 4 months ago
  0

• Quality Control subworkflow

  #38 opened 4 months ago
  0

• Signature Deconvolution subworkflow

  #37 opened 4 months ago
  0

• dnds subworkflow

  #36 opened 4 months ago
  0

• Add TINC module

  #30 opened 4 months ago
  0

• wrong issue

  #29 opened 8 months ago
  0

• CNAqc multisample with list of mutations on private segments

  #28 opened 4 months ago
  0

• Single/multi-sample option-dependent inputs for subclonal deconvolution.

  #27 opened 4 months ago
  1

• SigProfiler Module

  #26 opened 4 months ago
  1

• Variant Annotation Subworkflow

  #21 opened 8 months ago
  1

• Manage running custom python script for pyclone to ctree conversion

  #15 opened 8 months ago
  1

• ctree module

  #14 opened 10 months ago
  1

• Freebayes is not compatible with EPYC architecture, my pipeline at the moment is partition dependent

  #11 opened 4 months ago
  0

• Maftools NF testing: input/reading maf files issue

  #10 opened 10 months ago
  3

• File error SEQUENZA_CNAqc

  #8 opened a year ago
  1

• AlphaMissense_hg38.tsv.gz tabix indexing issue VEP

  #7 opened a year ago
  1

• installation issue in Orfeo for freebayes depedencies (vcflib)

  #6 opened 4 months ago
  1

• Error while mounting singularity images for Nextflow pipelines: "failed to create file /image/root/etc/issue, because No space left on device"

  #5 opened 4 months ago
  3

• ddddffd

  #4 opened 8 months ago
  0

• Test issue

  #3 opened 4 months ago
  0

• Alpha missense support

  #2 opened a year ago
  0

• Annovar2maf conversion within NF

  #1 opened 10 months ago
  1