cduvallet

cduvallet's Stars

• hakimel/reveal.js

  The HTML Presentation Framework

  Language:JavaScript67.9k1.7k2.4k16.6k

• mwaskom/seaborn

  Statistical data visualization in Python

  Language:Python12.6k2642.6k1.9k

• pyjanitor-devs/pyjanitor

  Clean APIs for data cleaning. Python implementation of R package Janitor

  Language:Python1.4k18563170

• greenelab/deep-review

  A collaboratively written review paper on deep learning, genomics, and precision medicine

  Language:HTML1.3k128651271

• qiime2/qiime2

  Official repository for the QIIME 2 framework.

  Language:Python47339363241

• thomasgurry/amplicon_sequencing_pipeline

  Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.

  Language:Python326317

• MIT-BECL/awesome-becl-resources

  Awesome resources for biological engineering students compiled by the MIT Communication Lab

  22529

• qiime2/q2-types

  Language:Python17911641

• areyesq89/SummarizedBenchmark

  SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.

  Language:R153165

• SchlossLab/Sze_Obesity_mBio_2016

  Language:R1251110

• seangibbons/percentile_normalization

  Percentile-normalization method for correcting batch effects in case-control studies

  Language:Jupyter Notebook12224

• Gibbons-Lab/ccmb_workshop

  Data and materials for the CCMB workshop on Cloud Computing and Microbiome Bioinformatics.

  Language:Python8202

• swo/dbotu3

  Distribution-based OTU calling

  Language:Python7484

• JTFouquier/q2-ghost-tree

  QIIME 2 Plugin Development

  Language:Python4212

• felixduvallet/results-filecache

  A python decorator for caching computations to file. ccache for scientific processing pipelines.

  Language:Python3201

• almlab/info

  Lab info, useful resources, and other common goods

  Language:Jupyter Notebook2904

• irockafe/metabolomics_processing

  Language:Jupyter Notebook2301

• qiime2/dev-docs

  Developer documentation for QIIME 2

  Language:Python292912