Chan Zuckerberg Initiative
Finding new ways to leverage technology, community-driven solutions, and collaboration to accelerate progress in science and education.
Pinned Repositories
cellxgene
An interactive explorer for single-cell transcriptomics data
cellxgene-census
CZ CELLxGENE Discover Census
czi-prosemirror
Rich Text Editor built with React and ProseMirror
cztack
The CZI infrastructure stack.
fogg
Manage Infrastructure as Code with less pain.
MedMentions
A corpus of Biomedical papers annotated with mentions of UMLS entities.
miniwdl
Workflow Description Language developer tools & local runner
shasta
[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
software-mentions
sorbet-rails
A set of tools to make the Sorbet typechecker work with Ruby on Rails seamlessly.
Chan Zuckerberg Initiative's Repositories
chanzuckerberg/cellxgene
An interactive explorer for single-cell transcriptomics data
chanzuckerberg/fogg
Manage Infrastructure as Code with less pain.
chanzuckerberg/cellxgene-census
CZ CELLxGENE Discover Census
chanzuckerberg/czid-web
Infectious Disease Sequencing Platform
chanzuckerberg/cztack
The CZI infrastructure stack.
chanzuckerberg/single-cell-data-portal
The data portal supporting the submission, exploration, and management of projects and datasets to cellxgene.
chanzuckerberg/axe-storybook-testing
Command line interface for testing Storybook stories for accessibility.
chanzuckerberg/czid-workflows
Portable WDL workflows for CZ ID production pipelines
chanzuckerberg/single-cell-curation
Code and documentation for the curation of cellxgene datasets
chanzuckerberg/edu-design-system
Design system for Education Projects
chanzuckerberg/sci-components
2021 Science Design System Component Library
chanzuckerberg/cryoet-data-portal
CryoET Data Portal
chanzuckerberg/happy
Happy Path Deployment Tool
chanzuckerberg/czgenepi
chanzuckerberg/single-cell-explorer
Hosted version of cellxgene
chanzuckerberg/galago
Interpretation aids for genomic epidemiology
chanzuckerberg/open-science
curated links and customized materials to support biomedical researchers in implementing open science approaches
chanzuckerberg/go-misc
miscellaneous go code
chanzuckerberg/github-actions
A collection of re-usable GitHub Actions
chanzuckerberg/cellxgene-ontology-guide
Notebook guide: https://github.com/chanzuckerberg/cellxgene-ontology-guide/blob/main/api/python/notebooks/Python%20API.ipynb
chanzuckerberg/platformics
Codegen Python GraphQL Entity Framework
chanzuckerberg/cryoet-data-portal-backend
CryoET Data Portal API server & ingestion scripts
chanzuckerberg/homebrew-tap
chanzuckerberg/argus-artifacts
chanzuckerberg/camelot
chanzuckerberg/cryoet-data-portal-neuroglancer
CryoET Data Portal Neuroglancer configuration helper
chanzuckerberg/oss-archetypes
framework and guidelines for the many ways of doing OSS in science
chanzuckerberg/argo-helm-charts
chanzuckerberg/czid-amr-heatmap
Prototype code for creating CZID-esque heatmap using AMR pipeline data
chanzuckerberg/galago-labs
Development fork for Galago -- see github.com/chanzuckerberg/galago for stable version