Issues
- 0
cellxgene annotate 'file open' error (Win10)
#2668 opened by kloot - 0
[QUESTION] What is the expected format for the --gene-sets-file command?
#2666 opened by timothevanmeter - 0
why some of the atlases on cellxgene do not have PCA in them. How can we use them to annotate our sample.
#2664 opened by Sirin24 - 0
- 5
[FEATURE REQUEST] .CXG (TileDb compliant) format support from single-cell-explorer to cellxgene Annotate
#2655 opened by Neah-Ko - 2
- 3
Annotate - update BE dependencies
#2618 opened by dsadgat - 2
how to annotate the celltype
#2647 opened by zhendejuzi - 3
使用示例anndata文件启动 Annotate 开始报错如何解决呢
#2642 opened by woaichitudou123 - 3
Optimizing Large Dataset Loading and Differential Expression Analysis in local hosted CellxGene VM
#2630 opened by chunhuicai - 0
[QUESTION] Increase the size of dots/cells
#2639 opened by yalayoubi - 0
Annotate - update FE dependencies
#2617 opened by dsadgat - 3
Issue with opening files [BUG]
#2633 opened by ccnawrocki - 0
install document update needed
#2635 opened by yubin-ai - 1
- 1
[FEATURE REQUEST] Option to choose the dot plot order [low to high expression as in Scanpy]
#2624 opened by gokceneraslan - 11
[BUG] Cellxgene failing to launch h5ad files
#2625 opened by chryssiebrown - 0
Load data to cellxgene with SOMA 💡?
#2623 opened by rgranit - 5
Investigate options for app installers [SPIKE]
#2577 opened by atolopko-czi - 0
Feature request: distinguish zeros when plotting
#2616 opened by slinnarsson - 5
[BUG] Can not start cellxgene
#2615 opened by pati-ni - 0
Track outreach/partnership opportunities for predictive annotation in the single cell academic community (computational tool builders)
#2596 opened by MaximilianLombardo - 0
- 0
Advertise vignettes demonstrating use cases to grantee community - Single Cell Newsletter
#2592 opened by MaximilianLombardo - 0
Publish vignettes in docs site that demonstrate use cases of predictive annotation
#2591 opened by MaximilianLombardo - 0
05: Predictive Annotation
#2595 opened by MaximilianLombardo - 2
[QUESTION] Upload multiple datasets (.h5ad)
#2614 opened by vschnei - 5
- 2
[QUESTION] Ensembl gene name
#2606 opened by Edhelia - 3
[BUG]
#2612 opened by EMRutherford - 1
[BUG] AttributeError: module 'flask.json' has no attribute 'JSONEncoder'
#2608 opened by xaviergeorge - 1
[QUESTION] name of gene Ensembl ..
#2605 opened by Edhelia - 0
- 0
- 1
Deep Learning models trained on all the tissue types (one master model) (pan-tissue model)
#2594 opened by MaximilianLombardo - 1
LR Models trained on all the tissue types (one master model) (pan-tissue model)
#2589 opened by MaximilianLombardo - 1
- 1
Implement Evaluation metrics: measuring distance via ontological relationships
#2587 opened by MaximilianLombardo - 0
[FEATURE REQUEST] resize left and right panes.
#2602 opened by crichgriffin - 3
- 3
differential expression with low number of genes
#2597 opened by hschult - 10
- 0
05: Predictive Annotation
#2586 opened by MaximilianLombardo - 1
More export options from web interface
#2583 opened by royfrancis - 1
Hide commands not installed with pip qualifier
#2570 opened by atolopko-czi - 0
Test epic
#2582 opened by maniarathi - 4
[BUG] Seurat v3 objects missing "key" in assays
#2575 opened by zdebruine - 3
debug cellxgene annotate on ubuntu
#2571 opened by atolopko-czi - 0
icons being served to wrong static folder
#2573 opened by seve - 1
Saving configuration state
#2569 opened by scheuerm