Pinned Repositories
legacy-validator
Validator for the Brain Imaging Data Structure
Adaptive-Thresholding
Combination of Gamma Gaussian Mixture model and topological FDR for thresholding fMRI statistical maps.
alleninf
Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
nipype
Pipelines and interfaces for neuroimaging packages
pypls
Partial Least Squares with permutation and bootstrap tests in python
NeuroVault
Easy to use web database for statistical maps.
fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
nipype
Workflows and interfaces for neuroimaging packages
openneuro
A free and open platform for analyzing and sharing neuroimaging data
chrisgorgo's Repositories
chrisgorgo/openneuro
A free and open platform for analyzing and sharing neuroimaging data
chrisgorgo/peaks2maps
chrisgorgo/blueprint-resourcesharing
Template resource sharing plans for grant applications
chrisgorgo/chrisfilo.github.io
chrisgorgo/community-starter-kit
chrisgorgo/CONSNet
CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks
chrisgorgo/github_pages_uploader
Command line tool and Python library for uploading files to GitHub Pages.
chrisgorgo/mriqc_test3
chrisgorgo/mriqc_test4
chrisgorgo/mriqc_test5
chrisgorgo/mriqc_test_5
chrisgorgo/mriqc_test_6
chrisgorgo/mriqc_test_upload2
chrisgorgo/mriqc_upload_test
chrisgorgo/neurovault_data
Installation data and other files for NeuroVault.
chrisgorgo/octoshare_test
chrisgorgo/openMorph
Curated list of open-access databases with human structural MRI data
chrisgorgo/pyBIDSconv
GUI based converter for MR dicoms to BIDS structure
chrisgorgo/pygithub_test
chrisgorgo/pygithub_test2
chrisgorgo/python_testing_nhw17
chrisgorgo/templates
chrisgorgo/test33
chrisgorgo/test333
chrisgorgo/test666
chrisgorgo/test67
chrisgorgo/test_upload
chrisgorgo/testing_tutorial
chrisgorgo/training-kit
Open source on demand courses and cheat sheets for Git and GitHub
chrisgorgo/upload_test_26