nipreps/mriqc

Issues

• Can't run mriqc group analysis on a subset of the sample (separate echos)

  #1353 opened 7 months ago by caaam3
  3

• Avoid unexpected exists when performing T1w images with low qualities

  #1318 opened 7 months ago by Clancy-wu
  4

• mriqc 24.0.2 crash

  #1360 opened 5 months ago by bpinsard
  1

• Is it possible to not hardcode HOME in Dockerfile?

  #1307 opened 9 months ago by yarikoptic
  3

• Multi-shell DTI report showing same SNR for best and worst volumes

  #1358 opened 6 months ago by HQHuang
  0

• Exception raised while executing Node _UploadMetric

  #1352 opened 7 months ago by DVSneuro
  4

• Error with metric upload to API

  #1319 opened 7 months ago by mckenziephagen
  6

• BUG: puzzling erroneous version reporting in docker

  #1354 opened 7 months ago by bpinsard
  4

• T2w and acq-hippo_T2w mixed up in report

  #1303 opened 10 months ago by dkp
  5

• DWI bids compliant but MRIQC cannot process

  #1302 opened 7 months ago by dkp
  17

• Node ``mriqc.interfaces.functional.Spikes`` is a memory hog

  #1350 opened 7 months ago by oesteban
  0

• FileNotFoundError during funcMRIQC processing

  #1322 opened 7 months ago by suxpert
  4

• non-readable python files in a container

  #1304 opened 9 months ago by yarikoptic
  3

• BIDS filters apparently not working for T1w and T2w

  #1331 opened 7 months ago by oesteban
  0

• DWI pipeline -- ``RuntimeWarning``

  #1333 opened 7 months ago by oesteban
  2

• Type annotation of config module

  #1248 opened 7 months ago by oesteban
  5

• Filter metadata fields before plugging into the report.

  #1287 opened a year ago by oesteban
  1

• PlotMosaicNoise node receives two connections to "in_file"

  #1298 opened 7 months ago by tclose
  0

• concurrent.futures error

  #1275 opened 7 months ago by madeleinebarter
  8

• Numeric overflow when computing drift on int16 DWI (that has slope)

  #1315 opened 7 months ago by psadil
  0

• Multi-echo BOLD pipeline: potential waste relating/after metadata extraction

  #1316 opened 7 months ago by oesteban
  0

• Incorrect setting of `num_threads` instead of `n_procs` on nipype node

  #1308 opened 8 months ago by oesteban
  0

• MRIQC trouble with multiecho data?

  #1300 opened 10 months ago by jameswyngaarden
  2

• IQMs for DWI report

  #1305 opened 9 months ago by dkp
  0

• Add UploadMetrics to Diffusion workflow?

  #1297 opened a year ago by agt24
  1

• Further problem with multi-echo lists: `TypeError: unhashable type: 'list'`

  #1290 opened a year ago by celprov
  2

• Generate a summary reportlet for DWI too

  #1247 opened a year ago by oesteban
  2

• Add a carpetplot reportlet to the DWI reports

  #1246 opened a year ago by oesteban
  1

• TypeError: expected str, bytes or os.PathLike object, not list

  #1282 opened a year ago by DVSneuro
  6

• Head motion estimation on DWI is poor

  #1283 opened a year ago by oesteban
  2

• Better visualizations of slice dropout and head motion

  #1284 opened a year ago by oesteban
  0

• IndexError in the initial steps of the participant level when saving the config file

  #1264 opened a year ago by oesteban
  5

• Add ruff to development dependencies

  #1270 opened a year ago by zvi-quantivly
  1

• Remove pre-commit from development dependencies

  #1268 opened a year ago by zvi-quantivly
  0

• Can not accquire interactive figure of group-level analysis report

  #1260 opened a year ago by WangYunHong98
  5

• Add a pre-commit configuration file

  #1267 opened a year ago by zvi-quantivly
  2

• Enable DWI group reports

  #1265 opened a year ago by oesteban
  0

• DWI Ghosting IQM

  #1263 opened a year ago by araikes
  4

• Trait Error after installing SynthStrip

  #1252 opened a year ago by madeleinebarter
  2

• Refine PIESNO

  #1231 opened a year ago by arokem
  1

• New metric: Signal drift delta and speed (over the TR)

  #1256 opened a year ago by oesteban
  0

• New metric: Directional derivative along Z to find slices with global signal drop

  #1255 opened a year ago by oesteban
  0

• DEC maps for DWI workflow

  #1223 opened a year ago by araikes
  3

• BOLD group reports - use different hues, e.g., for different tasks

  #1250 opened a year ago by oesteban
  0

• Dropping inputs on the basis of too-short runs crashes at report generation (DWI)

  #1244 opened a year ago by oesteban
  0

• Warning from ``numexpr.utils`` - Note: NumExpr detected 36 cores but NUMEXPR_MAX_THREADS not set, so enforcing safe limit of 8

  #1237 opened a year ago by oesteban
  0

• Inefficient BIDS Layout initialization

  #1236 opened a year ago by oesteban
  0

• MRIQC TypeError: ‘reversed’ is an invalid keyword argument for sort()

  #1235 opened a year ago by WangYunHong98
  2

• Potential bug: duplciate `tpms_std2t1w` nodes in spatial_normalization workflow

  #1232 opened a year ago by tclose
  1

• Re-enable spikes percentage IQMs after first stab at DWI IQMs

  #1222 opened a year ago by oesteban
  0