Pinned Repositories
legacy-validator
Validator for the Brain Imaging Data Structure
Adaptive-Thresholding
Combination of Gamma Gaussian Mixture model and topological FDR for thresholding fMRI statistical maps.
alleninf
Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
nipype
Pipelines and interfaces for neuroimaging packages
pypls
Partial Least Squares with permutation and bootstrap tests in python
NeuroVault
Easy to use web database for statistical maps.
fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
nipype
Workflows and interfaces for neuroimaging packages
openneuro
A free and open platform for analyzing and sharing neuroimaging data
chrisgorgo's Repositories
chrisgorgo/zenodo.js
JavaScript library for interacting with Zenodo API
chrisgorgo/pybids
Python package to access BIDS datasets (yet to get going)
chrisgorgo/psychologyidol
chrisgorgo/ANTs
Advanced Normalization Tools (ANTs)
chrisgorgo/aws-cli
Containerized AWS CLI on alpine to avoid requiring the aws cli to be installed on CI machines.
chrisgorgo/BEGAN-tensorflow
python3 / Implementation of Google Brain's BEGAN in Tensorflow
chrisgorgo/BIDS
Brain Imaging Data Structure
chrisgorgo/boutiques
JSON schema and tools for boutiques application descriptors.
chrisgorgo/BrainsForPublication
Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon
chrisgorgo/cbrain_bids_apps_runner
chrisgorgo/cbstools-public
Open copy of the CBS Tools software repository
chrisgorgo/ciftify
The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
chrisgorgo/dataladtesting
chrisgorgo/DPARSF
chrisgorgo/freya
Issues and milestones for the FREYA project
chrisgorgo/git_demo
chrisgorgo/glaswegian_extravaganza
alonzi
chrisgorgo/marvin
chrisgorgo/me-ica
Core code for ME-ICA command line interface
chrisgorgo/metacurious
prototype of a browser based literature review tool
chrisgorgo/mriqc-1
The package provides a series of image processing workflows to extract and compute a series of NR (no-reference), IQMs (image quality metrics) to be used in QAPs (quality assessment protocols) for MRI (magnetic resonance imaging).
chrisgorgo/ndmg
chrisgorgo/nhw2017
chrisgorgo/nilearn
Machine learning for NeuroImaging in Python
chrisgorgo/node-ignore
🔍 node-ignore is the manager and filter for .gitignore rules.
chrisgorgo/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
chrisgorgo/peaks2maps.nhw
chrisgorgo/python_testing
chrisgorgo/tensorflow
Computation using data flow graphs for scalable machine learning
chrisgorgo/testingdatalad2