Issues
- 1
- 0
- 0
Fail to build with singularity
#33 opened by Elena-TKO - 2
scafe.workflow.sc.solo Quitting: Auto detection of TS oligo failed. Average softclip length is ambiguous.
#23 opened by marsa04 - 0
failed to run scRNA-seq demo data
#32 opened by Guofeng527220 - 0
- 1
Rscript is not installed properly.
#24 opened by yxsee - 0
failed at running scafe.tool.sc.bam_to_ctss
#28 opened by weitaiwu - 2
- 0
Failed at scafe.workflow.cm.aggregate line 536
#27 opened by raunakkar - 6
- 2
Two very nearby clusters don't get merged, confusion ensues in `directionality`
#26 opened by ktpolanski - 0
Reference handling in an automated, multi-sample container setting (with workarounds)
#25 opened by ktpolanski - 2
using 10X references
#22 opened by ktpolanski - 3
- 3
About scafe.workflow.cm.aggregate
#18 opened by jiawei-zhong - 1
non-10x compatibility
#14 opened by ysun-8 - 3
dropbox access failed
#17 opened by marsa04 - 4
About "mouse ENCODE CREs"
#16 opened by jiawei-zhong - 2
Died scafe.workflow.sc.solo line 556
#15 opened by marsa04 - 1
Results of count not found. Quitting
#13 opened by houruiyan - 1
SC5P-PE and SC5P-R2
#10 opened by p4rkerw - 1
The error when running the scafe.workflow.sc.pool
#12 opened by houruiyan - 1
pooling of multiple samples
#8 opened by baigal628 - 2
genome does not have chrom_name_path
#11 opened by houruiyan - 2
- 0
111
#9 opened by pengjin0210 - 5
Bedtools issue
#4 opened by GBeattie - 1
scafe.workflow.sc.solo dies at line 551
#3 opened by lanyanjun