yxsee

Pinned Repositories

SCAFE
Single Cell Analysis of Five'Ends
Language:Perl43 3 2911
flexiplex
The Flexible Demultiplexer
Language:C++23 2 272
SEACells
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Language:Jupyter Notebook142 7 5826
JayShinLab.github.io
Language:CSS00
Mixscale
Language:R7 2 90
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
Language:Python00
popscle
A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools
Language:C++00
popscle_helper_tools
Helper tools for popscle
Language:Shell00
SCAFE
Single Cell Analysis of Five'Ends
Language:Perl00
topGO-feat
Enrichment Analysis for Gene Ontology. This version has "enrichment_barplot" function added to the package
Language:R00

yxsee's Repositories

yxsee/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
Language:Python00
yxsee/popscle
A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools
Language:C++00
yxsee/popscle_helper_tools
Helper tools for popscle
Language:Shell00
yxsee/SCAFE
Single Cell Analysis of Five'Ends
Language:Perl00
yxsee/topGO-feat
Enrichment Analysis for Gene Ontology. This version has "enrichment_barplot" function added to the package
Language:R00