danielecook

danielecook's Stars

• labmlai/annotated_deep_learning_paper_implementations

  🧑‍🏫 60+ Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠

  Language:Python57.8k4611335.9k

• astral-sh/uv

  An extremely fast Python package and project manager, written in Rust.

  Language:Rust35.3k764.7k963

• cameron314/concurrentqueue

  A fast multi-producer, multi-consumer lock-free concurrent queue for C++11

  Language:C++10.5k3403301.7k

• vosen/ZLUDA

  CUDA on non-NVIDIA GPUs

  Language:Rust10.3k141183671

• srush/GPU-Puzzles

  Solve puzzles. Learn CUDA.

  Language:Jupyter Notebook10.3k17032887

• NVIDIA/warp

  A Python framework for high performance GPU simulation and graphics

  Language:Python4.4k50307253

• AnswerDotAI/gpu.cpp

  A lightweight library for portable low-level GPU computation using WebGPU.

  Language:C++3.8k4824177

• gpu-mode/lectures

  Material for gpu-mode lectures

  Language:Jupyter Notebook3.5k519348

• posit-dev/positron

  Positron, a next-generation data science IDE

  Language:TypeScript3k343.2k92

• bvaisvil/zenith

  Zenith - sort of like top or htop but with zoom-able charts, CPU, GPU, network, and disk usage

  Language:Rust2.7k2510070

• sustcsonglin/flash-linear-attention

  Efficient implementations of state-of-the-art linear attention models in Pytorch and Triton

  Language:Python1.5k286771

• ustaxes/UsTaxes

  Tax filing web application

  Language:TypeScript1.4k19151108

• google-deepmind/searchless_chess

  Grandmaster-Level Chess Without Search

  Language:Python53711329

• cjweeks/tensorflow-cmake

  Integrate TensorFlow with CMake projects effortlessly

  Language:Shell332234779

• rust-bio/rust-htslib

  This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

  Language:Rust3132916581

• thegenemyers/FASTGA

  Pairwise whole genome aligner

  Language:C1431036

• TimD1/vcfdist

  vcfdist: Accurately benchmarking phased variant calls

  Language:C++796337

• PengNi/ccsmeth

  Detecting DNA methylation from PacBio CCS reads

  Language:Python7515111

• alfredapp/openai-workflow

  OpenAI integrations

  6944236

• huangnengCSU/longcallR

  LongcallR is a small variant caller for single molecule long-read RNA-seq data

  Language:Rust42314

• jltsiren/gbwt-rs

  GBWT in Rust

  Language:Rust42514

• John-Jumper/Upside-MD

  Coarse-grained molecular dynamics for protein physics

  Language:C++423111

• parklab/MuSiCal

  A comprehensive toolkit for mutational signature analysis

  Language:Python343355

• PacificBiosciences/HiFi-SVTopo

  Complex structural variant visualization for HiFi sequencing data

  Language:Python27641

• xuyecan/alfred-chathub

  A chat alfred-workflow that integrates multiple popular large language model (LLM) services, including OpenAI, Anthropic, Gemini, etc

  Language:Python23213

• Zilong-Li/vcfpp

  a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.

  Language:C++23213

• jelmer/setuptools-protobuf

  protobuf support for setuptools

  Language:Python15375

• Daniel-Liu-c0deb0t/dlb-kmer-sampling

  Optimal distance lower bound k-mer sampling.

  Language:Rust1210

• LoqLab/loq

  talk to type

  Language:Shell10212

• jameslan/setuptools-proto

  setuptools plugin to compile .proto files using python-betterproto

  Language:Python6201