Datasnakes

awesome-reproducible-R

An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.

beRi

beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R

github-readme-templates

Easy to use README templates for a python project or python module

htseq-count-cluster

A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.

OrthoEvolution

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

python-hands-on-tutorial

A hands-on Python3 tutorial. 🐍

renv

Creating virtual environments for R.

rinse

A configurable installer CLI for installing R from source (sudo and non-sudo).

roxygen-tags

A comprehensive list of roxygen tags and their use cases. 🏷️

rut

A cli of r utilities aimed at package and .Rprofile management.

datasnakes/r-color-palettes

Comprehensive list of color palettes available in r

datasnakes/qsubmitter

An R package to submit arbitrary jobs to a remote SGE cluster

datasnakes/cookiecutter-orthoevol

A cookiecutter template for the OrthoEvol python package

datasnakes/biopython

Official git repository for Biopython (converted from CVS)

datasnakes/halvade

Parallel read alignment and variant calling using MapReduce

datasnakes/htseq

HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.

datasnakes/biosql

datasnakes/BioSQL-Extensions

Extra tables and views to be loaded into a BioSQL database for proteomic and genomic applications

datasnakes/queue_stat

A job queue monitor for systems that use the "qstat" command.

datasnakes/Datasnakes-Flask-Cookie

A flask template with Bootstrap 3, asset bundling+minification, starter templates, and registration/authentication. For use with cookiecutter.

datasnakes/micropower

power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA