dmichalak's Stars
cxli233/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
tlecomte/friture
Real-time audio visualizations (spectrum, spectrogram, etc.)
LazyVim/starter
Starter template for LazyVim
markjay4k/Audio-Spectrum-Analyzer-in-Python
A series of Jupyter notebooks and python files which stream audio from a microphone using pyaudio, then processes it.
in-formant/in-formant
software for real-time voice analysis
czimaginginstitute/MotionCor3
Anisotropic correction of beam induced sample motion for cryo-electron microscopy and tomography
czimaginginstitute/AreTomo2
warpem/warp
SBC-Utrecht/pytom-match-pick
GPU-accelerated template matching for cryo-ET
MLI-lab/DeepDeWedge
Self-supervised deep learning for denoising and missing wedge reconstruction of cryo-ET tomograms
Tobotis/fourier-guide
An interactive guide to the Fourier-Transform.
olibclarke/chimerax-trimmings
Useful aliases and startup settings for ChimeraX
3dem/DynaMight
Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset
haesleinhuepf/awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
bpowell122/tomodrgn
Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
carsonpurnell/cryotomosim_CTS
cryo-EM tomogram simulator
bforsbe/OccuPy
cellcanvas/surforama
a tool for using surfaces to explore volumetric data in napari
hanjinliu/Chimerax-clix
An intelligent command line interface for ChimeraX
ma-gilles/recovar
STRIDES/NIHCloudLabAWS
Documentation and tutorials on using AWS for biomedical research
CellArchLab/cryoet-scripts
Miscellaneous scripts for processing cryo-ET data
logicvay2010/TomoNet
TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing
flatironinstitute/Ensemble-reweighting-using-Cryo-EM-particles
KosinskiLab/colabseg
Jupyter-based tool for membrane segmentation manipulation
teamtomo/cryohub
IO hub for Cryo-EM, Cryo-ET and subtomogram averaging data.
pydev-guide/pyrepo-copier
Template for creating a new python repository
bionanopatterning/Ais
brisvag/starfile.vim
VIM syntax for STAR/CIF files.
ddurfee/TemperamentStudio
Temperament Studio - a program that lets you experiment with different musical tuning schemes