Pinned Repositories
An-Introduction-To-Applied-Bioinformatics
Interactive lessons in bioinformatics.
built-iab
The latest Jupyter notebooks for An Introduction to Applied Bioinformatics.
galaxy
Data intensive science for everyone.
js-bootcamp
q2-sqrt
Plugin made at FAES18 as an example
q2galaxy
Prototype interface for automatically generating Galaxy tools from QIIME 2 actions
q2studio
Prototype graphical user interface for QIIME 2
q2view-old
A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
qiime2
Official repository for the QIIME 2 framework.
scikit-bio
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
ebolyen's Repositories
ebolyen/galaxy
Data intensive science for everyone.
ebolyen/2022.1-faes-tutorial
JupyterBook for QIIME 2 FAES January 2022 workshop
ebolyen/aoc21
ebolyen/auspice
Web app for visualizing pathogen evolution
ebolyen/bioconda-recipes
Conda recipes for the bioconda channel.
ebolyen/busywork
ebolyen/covid-ci
Continuous deployment of covid analyses using Concourse CI
ebolyen/dev-docs
Developer documentation for QIIME 2
ebolyen/dev-provisioning
Reproducable dev environment for Arch Linux (Antergos)
ebolyen/docs
Source repository for https://docs.qiime2.org
ebolyen/docs.qiime2.org
https://docs.qiime2.org live site
ebolyen/Keemei
Validate tabular bioinformatics file formats in Google Sheets
ebolyen/library
ebolyen/q2-beast
ebolyen/q2-classo
ebolyen/q2-covid-19
ebolyen/q2-dada2
R scripts for DADA2 QIIME2 plugin
ebolyen/q2-decontam
qiime2 decontam plugin
ebolyen/q2-longitudinal
QIIME2 plugin for paired sample comparisons
ebolyen/q2-mystery-stew
This plugin exists to define integration tests between interfaces and the framework.
ebolyen/q2-phylogeny
Phylogenetic reconstruction, and operations on phylogenetic trees.
ebolyen/q2-reveal
ebolyen/q2-sra
DO NOT USE: parts for scrap
ebolyen/q2-treetime
Not ready for use.
ebolyen/q2studio
A web interface for QIIME 2
ebolyen/qiime2.github.io
QIIME 2 project front page
ebolyen/simple-remote-directory-resource
Concourse resource for handling remote directories
ebolyen/sphinx
Main repository for the Sphinx documentation builder
ebolyen/sphinx-ext-qiime2
ebolyen/workshop-playbooks