Pinned Repositories
4Magnus
Some scripts to help magnus with his sequences
aliceflow
NextFlow framework to streamline the Genalice variant call pipeline
DBS_Analysis
fragplot
Python script to plot fragment sizes from two csv files (minIon and fragmentanalyzer).
RawDataDistribution
Small script to quickly plot the spatial distribution of raw data from fastq files.
scripts
Some scripts that I use now and then.
SEAseq
Script for analysis of SEAseq data
st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
taggd
Genetic barcode demultiplexing
TCR
A pipe for extracting TCRs from RNAseq data.
elhb's Repositories
elhb/RawDataDistribution
Small script to quickly plot the spatial distribution of raw data from fastq files.
elhb/SEAseq
Script for analysis of SEAseq data
elhb/4Magnus
Some scripts to help magnus with his sequences
elhb/aliceflow
NextFlow framework to streamline the Genalice variant call pipeline
elhb/DBS_Analysis
elhb/fragplot
Python script to plot fragment sizes from two csv files (minIon and fragmentanalyzer).
elhb/scripts
Some scripts that I use now and then.
elhb/st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
elhb/taggd
Genetic barcode demultiplexing
elhb/TCR
A pipe for extracting TCRs from RNAseq data.
elhb/BestPracticesWorkshop
Repository for the workshop "Best practices on development"
elhb/borgstrom
python course ...
elhb/charter
elhb/fatemapping
elhb/file_tracker
Just for fun file tracker.
elhb/GA_16_14.10X_Chromium_evaluation
GA_16_14.10X_Chromium_evaluation
elhb/oskar_web
elhb/python_koans
Python Koans - Learn Python through TDD
elhb/seqcapPG
elhb/singlecell_genome_analysis
elhb/singleFatCellExomeAnalysis
elhb/slideshow-screensaver
Simple slideshow screensaver implemented with Python 2.7 and Pygame
elhb/st_analysis
A toolkit for visualisation and analysis of Spatial Transcriptomics datasets
elhb/st_spot_detector
A web tool to do automatic spots detections and positional adjustments for ST Datasets.
elhb/test_0
Description
elhb/try_git
elhb/TwoTaggingScripts
elhb/vcf_comparison_september_2016
elhb/wfaCleanup
Script for the Magnatrix 1200
elhb/WGAcomparison
Scripts for the WGA comparison project