fiberseq/FIRE

Issues

• error with the Snakemake

  #31 opened 4 months ago by bshrestha617
  1

• seed option for 'bedtools shuffle' in FDR-peaks.smk

  #26 opened 5 months ago by RisaWatanabe
  2

• Different #peaks in 'peaks-vs-percent.pdf'

  #28 opened 5 months ago by RisaWatanabe
  3

• Difference in number of FIRE peaks in 'aligned data' vs 'align+phased data' from the same k-mer-variant-phasing run

  #27 opened 6 months ago by RisaWatanabe
  2

• Issues with new update

  #25 opened 6 months ago by dverac
  1

• Output model.results.bed.gz

  #24 opened 8 months ago by ywang285
  3

• FIRE element size distribution

  #21 opened 8 months ago by ywang285
  1

• Typo for installing snakemake executor plugin

  #20 opened 8 months ago by tbenavi1
  2

• bad links

  #19 opened 8 months ago by kerrybubb
  1

• Error message with latest FIRE: polars.exceptions.ComputeError: cannot sort column of dtype `null`

  #16 opened 8 months ago by ywang285
  3

• TypeError: can only concatenate str (not "list") to str

  #12 opened 9 months ago by mzaran-altius
  5

• FDR and track calculation error

  #13 opened 9 months ago by mrvollger
  3

• Questions about FIRE and ft add-nucleosomes

  #9 opened 10 months ago by ywang285
  2

• Questions about FIRE installation

  #10 opened a year ago by dverac
  9

• FIRE on targeted seq data: fiber-locations-shuffled.bed.gz is created empty

  #7 opened a year ago by Strausyatina
  7

• Order of phasing and fibertools

  #5 opened a year ago by tbenavi1
  2

• modwt required but not mentioned in README

  #4 opened a year ago by MorganHamm
  1

• Error in rule wide_fdr_peaks

  #2 opened a year ago by StephanieBohaczuk
  1