ga4gh/ga4gh-server
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
PythonApache-2.0
Issues
- 0
Remove individual and biosample from registry
#1554 opened - 0
Add peewee to RTD environment
#1552 opened - 0
Improve performance of rnaseq2ga module
#1549 opened - 3
Ship with a standalone WSGI server
#1548 opened - 7
One-button release
#1546 opened - 1
Callsets/search 400 from biosample ID
#1544 opened - 1
Add a variantset from BEDPE
#1543 opened - 0
Basic file serving
#1542 opened - 1
Frontend refactor
#1540 opened - 1
Implement VCF filter fields
#1539 opened - 1
Package for conda
#1537 opened - 1
Make the 0.3.5 release
#1536 opened - 1
Remove requirement for protoc binary
#1533 opened - 1
Biometadata parser
#1529 opened - 3
Allow "loose" referential integrity
#1528 opened - 1
- 0
List reference bases enforces range
#1524 opened - 0
Implement improved attributes
#1520 opened - 2
Importing gene-sample matrix
#1515 opened - 0
Create release notes for v0.3.5
#1514 opened - 1
ReadTheDocs fails to build on Latest
#1510 opened - 1
Intermittent OIDC test failures due to cache
#1508 opened - 1
- 0
Config file flag should accept relative paths
#1506 opened - 0
Add option to tabix/bgzip VCF
#1505 opened - 1
Change read the docs URL
#1504 opened - 0
Ship with ontologies
#1503 opened - 0
Deployment/installation via pip
#1500 opened - 0
Repo manager modify/update callsets
#1498 opened - 0
Move convert_error_code to scripts
#1496 opened - 0
Manifest doesn't include templates
#1495 opened - 0
Move OIDC provider to separate module
#1494 opened - 1
Biometadata age
#1493 opened - 0
Registry Migrations
#1492 opened - 1
Add quality and filters to variant
#1491 opened - 1
Replace taxon ID with ontology term
#1490 opened - 0
Repo Manager GUI
#1489 opened - 2
Timestamp fixes
#1488 opened - 0
Implement updated ontology term
#1487 opened - 0
G2P Features search parses regex patterns
#1486 opened - 1
Update github workflow documentation
#1484 opened - 0
Test multiprocess environment
#1482 opened - 0
Document name generation rules for datarepo
#1480 opened - 0
Document gff3 parsing into FeatureSet
#1479 opened - 3
API server returns string type to all attributes
#1478 opened - 1
- 4
Documentation: `ga4gh.server.frontend` -> `ga4gh.frontend` in installation WSGI application file?
#1475 opened - 0
Move repository documentation to its own file
#1473 opened - 1
- 0
Move to protobuf 3.1
#1471 opened