ga4gh/ga4gh-server
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
PythonApache-2.0
Issues
- 5
ga4gh-example-data/registry.db is malformed
#1638 opened by zhangb1 - 9
Internal Server Error with master and release 0.3.6
#1637 opened by rdeborj - 1
Development status of GA4GH server
#1639 opened by wdesouza - 2
Server does not always return next page token
#1635 opened by wdesouza - 0
Deprecate pypi ga4gh package
#1633 opened by dcolligan - 3
Change readthedocs site to new one
#1617 opened by dcolligan - 3
Rename server pypi package
#1583 opened by dcolligan - 3
Fail to test ga4gh-server installation via pip
#1631 opened by wdesouza - 0
- 5
Fail to test Apache deployment with demo dataset
#1563 opened by wdesouza - 0
Update example data
#1628 opened by david4096 - 1
Add "update example data" to release process
#1629 opened by david4096 - 6
Update to Protobuf 3.2
#1623 opened by ljdursi - 1
Update release notes for the v0.3.6 release
#1597 opened by kozbo - 0
Use cyvcf2 for getting variants
#1626 opened by david4096 - 0
Add continuous set to repo docs
#1616 opened by david4096 - 0
Remove reference set from RNA repo manager
#1625 opened by david4096 - 2
Add _markerlib mac issue workaround to OS X docs
#1621 opened by kozbo - 12
Update Auth0 documentation
#1565 opened by wdesouza - 0
Convert Readme into a QuickStart page
#1606 opened by david4096 - 0
Make frontend "reflect" on the schemas
#1619 opened by david4096 - 3
Rename readthedocs tag for consistency
#1591 opened by dcolligan - 2
install prob ga4gh_repo add-referenceset
#1613 opened by jpdna - 0
Increase Test Coverage
#1618 opened by david4096 - 0
RTD badge not updating (github cache)
#1615 opened by david4096 - 15
Read the Docs (RTD) build failing
#1599 opened by david4096 - 1
Release edits
#1590 opened by david4096 - 1
Docker build broken
#1592 opened by kozbo - 2
GFF3 parser ignoring some features.
#1604 opened by ejacox - 0
- 0
FileOpenFailedException 500 error
#1571 opened by david4096 - 1
- 0
Add readgroups endpoint
#1601 opened by david4096 - 0
Use an external gff3 module
#1608 opened by david4096 - 0
Add transcripteffects endpoint
#1603 opened by david4096 - 0
Find or construct a VCF with filters
#1589 opened by david4096 - 0
Add calls endpoint
#1602 opened by david4096 - 3
Move datamodel to separate packages
#1586 opened by david4096 - 5
Rename repository
#1585 opened by dcolligan - 0
Switch URL validation to a module
#1594 opened by david4096 - 2
Unset protobuf values in JSON serialization
#1588 opened by david4096 - 0
Move nice file reading to common
#1595 opened by david4096 - 0
Add structural info to variant
#1575 opened by david4096 - 1
Search RNA Expressions by feature names rather than IDs
#1580 opened by kozbo - 13
Deploy from travis
#1569 opened by david4096 - 1
Rename repository
#1584 opened by david4096 - 0
Add feature name index to generate_gff3_db
#1570 opened by david4096 - 2
Remove RNA Quantification Set bug
#1560 opened by david4096 - 5
Proposal: test to prevent bad constraints.txt files from being merged into master
#1567 opened by dcolligan - 1
Master build failling
#1566 opened by dcolligan