Pinned Repositories
argparse_dataclass
Declarative CLIs with argparse and dataclasses
augur
Pipeline components for real-time phylodynamic analysis
aws-elastic-beanstalk-cli
The EB CLI is a command line interface for Elastic Beanstalk that provides interactive commands that simplify creating, updating and monitoring environments from a local repository.
BayesianMethods
BioD
Bioinformatics library in D. (utils for working with SAM, BAM, SFF formats)
canu
A single molecule sequence assembler for genomes large and small.
fastq_compression_comparison
Creating a simple Docker image to help perform comparisons for FASTQ compression
pybgen
Python module to process BGEN files as dosage data
sparseMEM-big
Big-genome modification to sparseMEM from Khan et al.
Suns
Suns Structural Search
godotgildor's Repositories
godotgildor/Suns
Suns Structural Search
godotgildor/sparseMEM-big
Big-genome modification to sparseMEM from Khan et al.
godotgildor/BayesianMethods
godotgildor/dna-me-pipeline
DCC/DAC methylation pipeline source
godotgildor/FALCON
FALCON: experimental PacBio diploid assembler
godotgildor/FALCON-integrate
Build and integration- testing for FALCON
godotgildor/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
godotgildor/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
godotgildor/mslib
MSL is a C++ library that enables the computational study of macromolecules.
godotgildor/Platypus
Platypus Variant Caller
godotgildor/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
godotgildor/smash
Benchmarking toolkit for variant calling
godotgildor/STAR
RNA-seq aligner
godotgildor/STAT-607
godotgildor/SuperCodons
Super Codons