kreshuklab/plant-seg

PyQT is not installed automatically, can't run napari interface

Opened this issue · 2 comments

Hello,

When I install plantseg with the command from documentation, it doesn't automatically install Napari's backend, adding pyqt explicitly helped:

mamba create -n plant-seg -c pytorch -c nvidia -c conda-forge -c lcerrone plantseg pytorch-cuda=11.7 cudatoolkit pyqt

Yes, true. Napari changed their build, and now it needs to be specified. I have just added pyqt to the installation instructions. @wolny Should we add pyqt to the conda recipe or leave it to the user to decide which backend to use?

Let's add pyqt to the conda recipe, so that it works out of the box.