helrick

PhD student in cancer genomics at EMBL-EBI (she/her)

EMBL-EBICambridge, UK

Pinned Repositories

stager
Share genomic and exomic datasets and request analyses. Deployed for Care4Rare.
Language:TypeScript7 4 2910
savana
Somatic structural variant caller for long-read data
Language:Python53 6 402
BamViewer
very preliminary code for an in browser Bam Viewer
Language:JavaScript1 1 00
git-tutorial
Repository for the Primers for Predocs 2022 Git Tutorial
1 1 160
journal-rss
track relevant journals' rss feeds via slackbot
Language:Python4 1 20
spine-segmentation-project
Repository for code and information relating to the spine segmentation assignment in CISC 472 (Medical Informatics)
Language:Python4 1 00
crescent-frontend
CReSCENT: CanceR Single Cell ExpressioN Toolkit | Portal: https://crescent.cloud | Docs: https://pughlab.github.io/crescent-frontend/
Language:R7 3 02

helrick/journal-rss
track relevant journals' rss feeds via slackbot
Language:Python4 1 20
helrick/spine-segmentation-project
Repository for code and information relating to the spine segmentation assignment in CISC 472 (Medical Informatics)
Language:Python4 1 00
helrick/BamViewer
very preliminary code for an in browser Bam Viewer
Language:JavaScript1 1 00
helrick/git-tutorial
Repository for the Primers for Predocs 2022 Git Tutorial
1 1 160
helrick/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 0
helrick/CaesarSalad
et(bd) tu, brute?
Language:JavaScript1 1
helrick/data-processing-utility-tools
Collection of utility tools for ARGO data processing
Language:Python0 0
helrick/DicomAnonymizer
Cross-platform program for anonymization of medical X-ray images according to the DICOM Anonymization Standard
Language:Python0 1
helrick/gridss
GRIDSS: the Genomic Rearrangement IDentification Software Suite
Language:Java0 0
helrick/premeditated-goofspiel
Programs and files relating to the Premeditated Goofspiel Tournament created for the MATH 339: Evolutionary Game Theory Final Project
Language:Python0 0
helrick/pycoMeth
DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets
Language:Python0 0
helrick/whatshap
Read-based phasing of genomic variants, also called haplotype assembly
Language:Python0 0