hermancollin

currently working on @axondeepseg

Montreal

Pinned Repositories

axondeepseg
Axon/Myelin segmentation using Deep Learning
Language:Python114 13 44532
model_seg_generalist
Axon and myelin segmentation model trained on all ADS datasets. Works across contrasts and resolutions.
Language:Python0 1 80
bids-examples
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
Language:MATLAB168 34 109134
axonmyelin-mask-dcgan
Axonmyelin mask generator
Language:Python00
bids-examples
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
Language:MATLAB00
gmm-sampled-histology
synthetic microscopy data
Language:Python00
seg-critic
Segmentation quality evaluator using a patchGAN
Language:Python00
ivadomed
Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.
Language:Python154 10 599149
utilities
Repository containing utility scripts for handling various aspects in a DL model training pipeline
Language:Python8 4 290
data-management
Repo that deals with datalad aspects for internal use
Language:Python4 10 3010

hermancollin's Repositories

hermancollin/axonmyelin-mask-dcgan
Axonmyelin mask generator
Language:Python00
hermancollin/bids-examples
A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
Language:MATLAB00
hermancollin/gmm-sampled-histology
synthetic microscopy data
Language:Python00
hermancollin/seg-critic
Segmentation quality evaluator using a patchGAN
Language:Python00