Pinned Repositories
10x-scATAC-2019
Publication Page for Satpathy*, Granja* et al 2019
ActivePathways
Integrative pathway enrichment analysis of multivariate omics data
addinslist
📜 Discover and install useful RStudio addins
advanced_programming
advanced programming
alacritty
A cross-platform, GPU-accelerated terminal emulator
analysis-workflows
Open workflow definitions for genomic analysis from MGI at WUSM.
awesome-python
A curated list of awesome Python frameworks, libraries and software.
stereoscope
Spatial mapping of cell types by integration of transcriptomics data
too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations.
URD
URD - Reconstruction of Branching Developmental Trajectories
hzongyao's Repositories
hzongyao/addinslist
📜 Discover and install useful RStudio addins
hzongyao/alacritty
A cross-platform, GPU-accelerated terminal emulator
hzongyao/analysis-workflows
Open workflow definitions for genomic analysis from MGI at WUSM.
hzongyao/asc_seurat
hzongyao/awesome-R
A curated list of awesome R packages, frameworks and software.
hzongyao/awesome-r-dataviz
Curated resources about Data Visualization, Drawing & Publishing in R
hzongyao/azimuth
A Shiny web app for mapping datasets using Seurat v4
hzongyao/BamDeal
BamDeal: a comprehensive toolkit for bam manipulation
hzongyao/Bob
Bob 是一款 Mac 端翻译软件，支持划词翻译、截图翻译以及手动输入翻译。
hzongyao/BoxPlotR.shiny
shiny application to generate box plots with R
hzongyao/cell2location
cell2location: High-throughput spatial mapping of cell types
hzongyao/CellChat
R toolkit for inference and analysis of cell-cell communication from single-cell data
hzongyao/confuns
Convenience R functions
hzongyao/EasyPubMed
EasyPubMed is an extension to make new PubMed easy to use
hzongyao/English-level-up-tips
An advanced guide to learn English which might benefit you a lot 🎉 . 可能是让你受益匪浅的英语进阶指南。
hzongyao/GeneTonic
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
hzongyao/handleBam
Implement the four steps in RNA-seq pipeline:mapping quality filter, deduplication, set annotations and stat gene expression data
hzongyao/job
job: free Your RStudio Console
hzongyao/P53_Lymphoma_project
P53_Lymphoma_project
hzongyao/pychopper
A tool to identify, orient, trim and rescue full length cDNA reads
hzongyao/samql
SQL-like query language for the SAM/BAM file format
hzongyao/SCENT
Estimation of Single-Cell Potency with Single Cell Entropy
hzongyao/scMetabolism
Quantifying metabolism activity at the single-cell resolution
hzongyao/seurat-wrappers
Community-provided extensions to Seurat
hzongyao/Seurat.utils
Various utility functions for Seurat v3
hzongyao/ShinyCell
Shiny Interactive Web Apps for Single-Cell Data
hzongyao/single-cell-nanopore
Workflow for Nanopore Sequencing of 10x single cell libraries
hzongyao/TBtools
GUI/CommandLine Tool Box for biologistists to utilize NGS data.
hzongyao/tinyarray
plots function for array
hzongyao/TranscriptClean
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome