imyiningliu

Graduate Student in CS@CU

Pinned Repositories

bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell1.6k 95 1.9k3.2k
plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
Language:Python85 7 13830
biopython
Official git repository for Biopython (originally converted from CVS)
Language:Python00
cellstitch
Language:Jupyter Notebook71
e6998-final-project
Language:Jupyter Notebook00
group-testing-probabilistic-framework
Language:Python0 1 00
NeuroSEED
Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)
Language:Python00
plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
Language:Python00
scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data
Language:Python1.2k 25 1k344
scVI-data
datasets for scVI
3 5 11

imyiningliu's Repositories

imyiningliu/cellstitch
Language:Jupyter Notebook71
imyiningliu/biopython
Official git repository for Biopython (originally converted from CVS)
Language:Python00
imyiningliu/e6998-final-project
Language:Jupyter Notebook00
imyiningliu/group-testing-probabilistic-framework
Language:Python0 1 00
imyiningliu/NeuroSEED
Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)
Language:Python00
imyiningliu/plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
Language:Python00