inab/SmartRNASeqCaller

Issues

• resources/hg38/intron_slice* -> intron_splice*

  #11 opened 3 years ago by brianjohnhaas
  0

• Issues installing caret package via docker/nextflow

  #10 opened 4 years ago by PrincescaDorsaint
  0

• Problems in predict_variants.R script

  #9 opened 4 years ago by dreammxy
  1

• Running smartRNASeqCaller on hg38

  #8 opened 5 years ago by travelanywhere
  2

• How to prepare resource files for hg38 ?

  #1 opened 5 years ago by ahy1221
  3

• Using RDConnect_RNASeq for input to SmartRNASeqCaller

  #4 opened 5 years ago by brianjohnhaas
  4

• Docker error

  #7 opened 5 years ago by PrincescaDorsaint
  11

• filters not compatible with 'chr' in chromosome identifiers. ie. requires '1' instead of 'chr1'

  #6 opened 5 years ago by brianjohnhaas
  1

• How many variants per cell should I expected after classification ?

  #2 opened 5 years ago by ahy1221
  1

• SmartRNASeqCaller/Nextflow/params.yaml intron file mis-spelling

  #5 opened 5 years ago by brianjohnhaas
  1

• Where is RNA edited sites from?

  #3 opened 5 years ago by wangshun1121
  1