j-andrews7

j-andrews7's Stars

• TheAlgorithms/Python

  All Algorithms implemented in Python

  Language:Python196k5.9k1.5k46.1k

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.3k25023996

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3.3k17111620

• GuidoBartoli/sherloq

  An open-source digital image forensic toolset

  Language:Perl2.7k5078257

• satijalab/seurat

  R toolkit for single cell genomics

  Language:R2.3k768.1k924

• nanxstats/ggsci

  🦄 Scientific journal and sci-fi themed color palettes for ggplot2

  Language:R676183471

• broadinstitute/infercnv

  Inferring CNV from Single-Cell RNA-Seq

  Language:R58440590169

• cellgeni/sceasy

  A package to help convert different single-cell data formats to each other

  Language:R39887757

• cole-trapnell-lab/monocle3

  Language:R36021647104

• j-andrews7/awesome-bioinformatics-benchmarks

  A curated and summarized list of bioinformatics bench-marking papers and resources.

  320184358

• ncborcherding/scRepertoire

  A toolkit for single-cell immune profiling

  Language:R3191238055

• lbenz730/ncaahoopR

  An R package for working with NCAA Basketball Play-by-Play Data

  Language:R2041810849

• dtm2451/dittoSeq

  Color blindness friendly visualization of single-cell and bulk RNA-sequencing data

  Language:R19257818

• SingleR-inc/SingleR

  Clone of the Bioconductor repository for the SingleR package.

  Language:R1821222419

• chrisamiller/fishplot

  Create timecourse "fish plots" that show changes in the clonal architecture of tumors

  Language:R165113846

• savvastj/nbashots

  NBA shot charts using matplotlib, seaborn, and bokeh.

  Language:Jupyter Notebook16413436

• ncborcherding/escape

  Easy single cell analysis platform for enrichment

  Language:R157311020

• meysubb/Sports_Data_Reference

  Where to find Sports data (R/Python/Other Languages)

  10487515

• j-andrews7/kenpompy

  A simple yet comprehensive web scraper for kenpom.com.

  Language:Python76145122

• diazlab/CONICS

  CONICS: COpy-Number analysis In single-Cell RNA-Sequencing

  Language:R7384228

• jflancer/bigballR

  Package for working with NCAA Basketball Data

  Language:R63103921

• SingleR-inc/celldex

  Collection of cell type reference datasets.

  Language:R487307

• lbenz730/ncaahoopR_data

  Data pulled from ncaahoopR

  346535

• amcdavid/CellaRepertorium

  Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)

  Language:C++153124

• JohnReid/DeLorean

  R package to model time series accounting for noise in the temporal dimension. Specifically designed for single cell transcriptome experiments.

  Language:TeX15464

• mediaforensics/medifor

  Media Forensics one-shot protocol, service wrapper, and basic client tools.

  Language:Go139712

• nsandholtz/lpl

  Empirical Demo of Lineup Points Lost

  Language:R12421

• RamRS/biostar-mod-templates

  Moderator Templates for https://www.biostars.org/

  11404

• j-andrews7/OneLinerOmics

  One liner analyses and visualizations for bulk RNA-seq and ChIP-seq data

  Language:R7301

• dtm2451/WIP-vignettes

  1500