Pinned Repositories
atlas-utils
tools for microbiome data analysis
benchmark
Bioinformatics scripts
biostack-suits
utils for building pipelines
denoise-kit
denoise amplicon sequencing data with USEARCH unoise3
dix-seq
Dix-seq: An integrated pipeline for fast amplicon data analysis
emapper-utils
emapper-utils: utils for parse emapper result
fastx-utils
fastx-utils using klib
ncbi-kit
Download NCBI assembly genomes with ftp. rsync, ascp
plasmids-inspect
Mining and annotation plasmids contigs and AMR genes from metagenome datasets
protocols
protocols for bioinformatics data analysis
jameslz's Repositories
jameslz/glia
a string to graph aligner
jameslz/Fastool
Simple and quick FastQ and FastA tool for file reading and conversion
jameslz/AmpliconClipper
AmpliconClipper is an alignment postprocessor that removes PCR primers from SAM alignments and discards reads with major errors.
jameslz/RDPTools
Collection of commonly used RDP Tools for easy building
jameslz/NGSplusplus
jameslz/dx-toolkit
DNAnexus platform client libraries.
jameslz/draft
C++ standards drafts