Pinned Repositories
barricklab
General data analysis spreadsheets and scripts
breseq
breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is intended for haploid microbial genomes (<20 Mb). breseq is a command line tool implemented in C++ and R.
breseq-gui
Electron GUI for breseq
brnaseq
Basic analysis of bacterial RNAseq data for differential gene expression
LTEE-Ecoli
Genomics resources for the Long-Term Evolution Experiment with E. coli
mutant-protein-stability
Modeling the effects of mutations in proteins using PyRosetta
ostir
Software for predicting translation initiation rates in bacteria
bioconda-recipes
Conda recipes for the bioconda channel.
gala
Galactic and gravitational dynamics in Python
getools
Tools for analyzing and visualizing microbial genome evolution data
jeffreybarrick's Repositories
jeffreybarrick/gala
Galactic and gravitational dynamics in Python
jeffreybarrick/getools
Tools for analyzing and visualizing microbial genome evolution data