jinworks/CellChat

Include databases broader than L-R interactions

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Hi, I'd like to use the MetaLinksDB for analysis, but since everything is set up for L-R pairs as Hugo Symbols, I cannot do anything. Would there be any workaround?

Thanks

[1] "Create a CellChat object from a Seurat object"
The `meta.data` slot in the Seurat object is used as cell meta information
Set cell identities for the new CellChat object
The cell groups used for CellChat analysis are (...)
Issue identified!! Please check the official Gene Symbol of the following genes:
 Cortisol Taurine Sphingosine Norepinephrine Leukotriene B4 Leukotriene C4 Isorhamnetin Lycopene gamma-Tocopherol alpha-Tocopherol Eicosapentaenoic acid Lipoxin A4
The number of highly variable ligand-receptor pairs used for signaling inference is 0
triMean is used for calculating the average gene expression per cell group.
Error in `[<-`(`*tmp*`, index.complexL, , value = data.complex) :
  subscript out of bounds