Pinned Repositories
GenomicRanges
Container class to represent genomic locations and support genomic analysis
rds2py
Read RDS files, in Python
epiviz
EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.
epiviz.gl
Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.
epiviz.heatmap.gl
Heatmap like plots
kana
Single cell analysis in the browser
kokoro
Ontology based search
nfpmShinyComponent
This package provides an API for interactive network visualization of gene-drug and gene-gene interactions.
kana
Single cell analysis in the browser
jkanche's Repositories
jkanche/kana
Single cell analysis in the browser
jkanche/kokoro
Ontology based search
jkanche/acceptable-anime-gifs
A curated set of GIFs that are reasonably SFW, primarily used to power annoying Slackbots.
jkanche/anndata
Annotated data.
jkanche/asynchronous-api-dask-terraform
Asynchronous API using Dask and AWS Fargate
jkanche/Bioc2020
jkanche/BiocReporting
Public repo for Bioconductor project reporting 2022
jkanche/cirrocumulus
Single-cell visualization
jkanche/dask-cloudprovider
Cloud provider cluster managers for Dask. Supports AWS, Google Cloud Azure and more...
jkanche/dask-docker
Docker images for dask
jkanche/epiviz
EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.
jkanche/epiviz-components-cdn
jkanche/epiviz.gl
visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.
jkanche/gEAR
The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
jkanche/go-wasm
jkanche/jkanche.github.io
personal website
jkanche/js.matrix
jkanche/offscreen-canvas-scrolling
jkanche/paper-range-slider
A material design-style range-slider, composed of paper-slider elements
jkanche/pegasus
A tool for analyzing trascriptomes of millions of single cells.
jkanche/pypi-terraform
Spin up PyPI registry on ECS
jkanche/Pyqtree
A pure Python quad tree spatial index for GIS or rendering usage
jkanche/pytximport
Feature-rich Python implementation of the tximport package for gene count estimation.
jkanche/rDGIdb
jkanche/ridges.js
make ridgeline plots
jkanche/sketches
jkanche/test-epiviz.scatter.gl
jkanche/test.scran.js.app
jkanche/uepiviz
micro(u) epiviz
jkanche/unicplot
make plots with unicode characters