jojyjohn28

Pinned Repositories

• spades

  SPAdes Genome Assembler

  Language:C++737321.1k134

• bowtie2

  A fast and sensitive gapped read aligner

  Language:C++66131428158

• kaiju

  Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

  Language:C2601427068

• GTDBTk

  GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

  Language:Python4662345382

• VirSorter2

  customizable pipeline to identify viral sequences from (meta)genomic data

  Language:Python212420928

• drep

  Rapid comparison and dereplication of genomes

  Language:Python247822236

jojyjohn28's Repositories