kayobianco

Pinned Repositories

chewBBACA
BSR-Based Allele Calling Algorithm
Language:HTML133 17 13927
SAM_Refiner
Program for gathering variant information from a SAM formated file.
Language:Python7 3 42
ViralFlow
Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM
Language:Python29 2 1214
gunc
Python package for detection of chimerism and contamination in prokaryotic genomes.
Language:Python67 5 388
abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
Language:Perl0 0 00
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
Language:JavaScript1.2k 35 1.6k602
metamlst
MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.
Language:Python13 3 11
groot
A resistome profiler for Graphing Resistance Out Of meTagenomes
Language:Go65 8 368

kayobianco/abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
Language:Perl0 0 00