Pinned Repositories
antismash
antiSMASH
aio-standalone
Standalone application server framework using asyncio
bioperl-hmmer3
BioPerl modules for HMMER3
covid-spike-classification
Detect interesting SARS-CoV-2 spike protein variants from Sanger sequencing data.
mockaioredis
Mock library to replace aioredis during unit tests (RETIRED)
ncbi-acc-download
Download files from NCBI Entrez by accession
ncbi-entrez-error-messages
A collection of error messages returned by NCBI Entrez
ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
supybot-gsoc
A collection of patches used to pimp gsocbot, the supybot of #gsoc
vim-fountain
A VIM syntax highlighting plugin for the Fountain screenplay format
kblin's Repositories
kblin/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
kblin/vim-fountain
A VIM syntax highlighting plugin for the Fountain screenplay format
kblin/merge-gbk-records
Merge multiple GenBank records using a defined spacer sequence
kblin/nrps-rs
A Rust reimplementation of NRPSPredictor2
kblin/nrpys
Python bindings for nrps-rs
kblin/antismash
antiSMASH
kblin/asdb-api
This is a port of the antiSMASH DB backend into Rust.
kblin/bioconda-recipes
Conda recipes for the bioconda channel.
kblin/python-mibig
Python handling of MIBiG data
kblin/asdb-import
antiSMASH DB importer
kblin/asdb-jobs
antiSMASH database background job runner
kblin/asdb-schema
The SQL database schema files for the antiSMASH DB
kblin/asdb-taxa
ASDB taxonomy handling
kblin/asdb-ui
The web UI for the antiSMASH database
kblin/asdb-ui-components
New web component based UI for the antiSMASH database
kblin/brawn
A python replacement for MUSCLE's profile-profile mode
kblin/clisky
A quick-and-dirty command line tool to post to Bluesky.
kblin/db-api
REST API for the antiSMASH database
kblin/dispatcher
Job dispatcher for antiSMASH, replacing runSMASH
kblin/dna-flipper
A tool to flip GenBank format DNA records to make sure genes of interest are on the right strand.
kblin/extract-pfam
Utility scripts to extract PFAM or TIGRFAM domains from antiSMASH results
kblin/ha-intents
Intents to be used with Home Assistant
kblin/kickstart.nvim
A launch point for your personal nvim configuration
kblin/legacy-bacterial-ui
A web UI for the bacterial version of antiSMASH.
kblin/mibig-api
the new API for MIBiG
kblin/mibig-html
kblin/mibig-json
Repository to track changes in MIBiG curation data stored in JSON format
kblin/submission-prototype
kblin/tagreader
Simple to build/use NFC tag reader, specially created for Home Assistant
kblin/websmash
A REST-like API for running antiSMASH style jobs